| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2604 |
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| Symbol | |
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| ID | 8358764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3190526 |
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| End bp | 3191866 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644964787 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_003122288 |
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| Protein GI | 256421635 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0330231 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTTTG ATGACTTAAA CCTGAGCAGA CCTTTACTCA ATGCACTGGA AGACCTGGGC
TATAAAACGC CTACGGTCAT ACAGCAAAAG GTGTTCTCAG TAGTGATGTC CGGTCAGGAT
GTATGTGGCA TTGCCCAGAC TGGTACGGGA AAGACCTTCG CTTATCTGCT GCCCTGTCTG
CGACAGTTTA AATTCTCCAA AGAACGCTTT CCGCAATTAC TTATCCTGGT GCCTACCCGT
GAACTGGTGG TACAGGTAGT AGACGCTGTT AAACAGCTGA CGCCTTATAT GAGCGTAGAA
ATAGCCGGTT TTTACGGAGG TGTGAATATG AATCCGCAAA TGGAGACCGC CTCCGGTAAA
CTGGACGTAG TAGTCGCTAC TCCCGGCCGC CTGGTAGATA TTGTGTTGAG CGGTACGCTG
AAACTCAAGG CGATTAAAAG AATCGTTATC GATGAGATGG ATGAGATGCT GAATCTCGGT
TTTCGTCCGC AGGTAGAGCG TATCCTTGAT CTCTTGCCTG TCAGAAGACA AAATCTCCTG
TTTTCCGCTA CCATTACCGA GGATGTGGAA AAGCTGATAC AAACACATTT TAACGCGCCC
GCTACCGTAG AAGCAGCACC GGCAGGTACG CCGCTGAAAA ATATCAGCCA GTCAGCCTAT
GACGTGCCGA ACTTCTATAC AAAAGTGAAT CTCCTTGAAC TGCTGCTGGC AAAAGACAGC
TCTATGAACA AGGTGCTGGT ATTTGTCGCC ACCAAGGAAA TGGCTAATGA CCTGTACGAG
CAACTGGAAA CCAAGTTCCC CGAACAGGCA GGCGTGATTC ATTCCAATAA GGCGCAGAAC
CACCGTTTTA ATACAGTTAA TAAATTCAAA GACGGTAGCT ACCGTTTTAT CATCGCTACA
GATATCATCG CCAGAGGTCT GGATATTGCA GAAGTATCAC ATGTGATCAG CTTTGATACA
CCGGAAGTAC CCGAAAGCTA TATGCACCGT ATCGGAAGAA CCGGTCGTGC TGATAAAGAA
GGGCATTCCA TCCTGTTTAC CAAACCACAG GAGAAAGAAA ACAAAGACAA TATCGAGGAA
CTGATGAATT ATCAGATTCC TGTATTGCCT TTACCTGAAG AACTGGTAAT CTCTGACGTG
CTGACCGAAG ATGAAAAACC ACAGGTGAAA ATGAAGAACT TCCTGATCAA ATTACCTAGC
AGAGAGGAAG CAGGACCAGC CTTCCATGAG AAATCAGCAA AGAATAAAAA AGTAAATGTG
AAGATCCGTC ATGCGGATAA GATGAAGCTG AAGTATGGTA AGCCCAAAAC GAGAGGTGCG
AAACCGAAAA GAAAACGATA G
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| Protein sequence | MTFDDLNLSR PLLNALEDLG YKTPTVIQQK VFSVVMSGQD VCGIAQTGTG KTFAYLLPCL
RQFKFSKERF PQLLILVPTR ELVVQVVDAV KQLTPYMSVE IAGFYGGVNM NPQMETASGK
LDVVVATPGR LVDIVLSGTL KLKAIKRIVI DEMDEMLNLG FRPQVERILD LLPVRRQNLL
FSATITEDVE KLIQTHFNAP ATVEAAPAGT PLKNISQSAY DVPNFYTKVN LLELLLAKDS
SMNKVLVFVA TKEMANDLYE QLETKFPEQA GVIHSNKAQN HRFNTVNKFK DGSYRFIIAT
DIIARGLDIA EVSHVISFDT PEVPESYMHR IGRTGRADKE GHSILFTKPQ EKENKDNIEE
LMNYQIPVLP LPEELVISDV LTEDEKPQVK MKNFLIKLPS REEAGPAFHE KSAKNKKVNV
KIRHADKMKL KYGKPKTRGA KPKRKR
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