| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2586 |
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| Symbol | |
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| ID | 8358746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 3168655 |
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| End bp | 3169338 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644964769 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_003122270 |
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| Protein GI | 256421617 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0130561 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTTC TGCTCGTTGA AGATAACATG GAGCTGGCCG GCAGCATTAG TAACTTTCTC
GAAAAGGAAG GTTATCTGTG CGAGGTAAGC TATACCAGCA GTGAAGCTTA TGATAAGTTG
TCAGGATTCC AGTATGACTG TGTGTTGCTG GATATCACCT TACCGGATGG AAACGGACTG
GAATTATTAC AGTTCATGCA CCTTGAAAAG ATTGACAGTT GTGTACTGAT TATTTCCGCG
AAAAACTCAC TGGACGATAA GATAAGCGGA CTGGAAGGCG GTGCGGATGA TTATCTGACC
AAACCTTTTC ATCTTCCTGA ATTACACGCC AGGCTAAGAG CCATCTTCAG AAGAAAGAAA
CTACAGGGGA GTAATATTGT GAGCTTTAAT GAGATCACGT TGAACACAGA TACGCTGGAA
GCGAGTGTGA ATGAGATCAG ACTGGATGTA ACGCCAAAGG AATTTGACCT GCTTTTGTAT
TTCCTTGTGA ACAAGAACAG GGTCTTATCC CGTCAGTCGA TTGCTGCGCA TCTGTGGGGC
GACTATACCG ATAACCTGGC TAATTTTGAC TTTGTATACC AGCATGTCAA GAATCTCCGG
AAGAAAATAC ATGCTGCAGA GGGAGCCGAT TATATCAATA CCGTATACGG ATTAGGTTAC
AAATTTAATA CTGCTGTATC ATGA
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| Protein sequence | MKVLLVEDNM ELAGSISNFL EKEGYLCEVS YTSSEAYDKL SGFQYDCVLL DITLPDGNGL
ELLQFMHLEK IDSCVLIISA KNSLDDKISG LEGGADDYLT KPFHLPELHA RLRAIFRRKK
LQGSNIVSFN EITLNTDTLE ASVNEIRLDV TPKEFDLLLY FLVNKNRVLS RQSIAAHLWG
DYTDNLANFD FVYQHVKNLR KKIHAAEGAD YINTVYGLGY KFNTAVS
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