| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2580 |
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| Symbol | |
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| ID | 8358740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3156512 |
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| End bp | 3159859 |
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| Gene Length | 3348 bp |
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| Protein Length | 1115 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644964763 |
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| Product | glycoside hydrolase family 18 |
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| Protein accession | YP_003122264 |
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| Protein GI | 256421611 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3325] Chitinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.492458 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.158237 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCC ATTACACAAA CCGGTTGTGC ATTCCACAAA GTATGCGTCA ACTAAGACTA
TTCTGTACAC TTTTGCTGCT GCTCCTCTGT CTGGGTGCGG AGCAGGCATT TTCCCAGCTG
TCCCGCCTGC GGGCAGATGG AAAACGTATC GTCAACGCCA GTAACCAGGA AGTGATCTTT
AAAGGGATCA ATGTCGGTGG CTGGCTGTTG CAGGAAGGAT ATATGATCAA ACCTTCCTTC
TCTGGCGGCG GTACACAATG GTCCATTAAA AAGCGCCTCT ATGACCAGGG GCAGAGCGAC
GCCGCGGTAG AAGCATTCTA CCAGAGCTGG CGTGACAATT TTATCACCAA AGCAGATATT
GATTACCTGG CTTCACAGGG TTTTAACAGT GTCCGCCTGC CGTTACATTA TGACCTTTTT
CTGACAGCTG CACAGCGGGC AGTAAGAAAT GGTGTAGCGC GTAACGCATC AACTTACAAC
AGCTATGTAA GTTCGCTGAC CACCTGGTAC AACAACAACC AGCTGTTCAA CGATCAGAAC
CTGGAAGGTT TCCGCCTGAC AGACAGCCTG TTGAAATGGT GTGCTGCCAA CAACATGTAT
GTGGTACTTG ACCTGCACGC AGCTCCGGGT GCTGCTGGTA CAGATGCCAA CATCTCTGAT
GCACTGATGG GTAATGACCT CTGGAACAAA CCTATCTATC AGGACATCAC CGTACGCTTA
TGGCAGCGTA TCTCTGCACG TTACATCAAT GATGACCGTG TAGGTTTTTA TGATCTGATC
AACGAACCAA ACAACGTTCC GGCTAATCAG AGTATCCACT CGCTCTTTGA AAGACTGATC
AACGCTATTC GTGCACAGGG TGACACACAC CTGTTAATGG TAGAAGGAAA TGGCTGGGGT
AACCAGTACA ACTACCTCGA ACCATTCACT TTTACCAACA GAAGTAACCT GGTGTACAAC
GCGCACCGTT ATGGTACTTC CACATCGACT ACAACCACCA ATGGCGATGC TAACCAGATC
AATGAACTGG GTAACATTAA CAACTTCCGT AACACACACA ATGTCCCGGT AGTAGTGGGA
GAGACCGGAG AAAACAACAG CAACTGGCTG CGTGCCAATA TCGCTGCGAT GAATGCTGCC
GGAGTGGGTT GGTTCCACTG GACCTACAAA CGTTTTGACG GTGGTGAAAA TGCCGCTTTA
TTGCGGATTC CTCCGCCATA CCTGATGGAT GGTGCCGGCA ATATGAGCGC TGTACTGAAT
AACATCAGGT TTGCCAACAA TGTAAAGAAC ACAAACACCA TCGCTGCCGT AGCGCCAGGC
AGAAGTTCTG CTAACGCGCC TGTCGGTAAA ACGATCTGGC TGCAGGGCTT TAACAACAAA
TACGTTAACT CAAAGAACGG TCAGGGCGCT ATGTGGTGCG ATTCTGATGC TCCACAGGCA
TGGGAACTCT TTACCGTGGT AGATGCAGGT AACGGTAAGA TCGCCCTGAG AGGTAACAAC
GGTATGTATG TTTCTTCTGA AAACGGTGAG CAGGCAATCA CCTGTAACAG ACCTGCTATT
CAGGGTTGGG AAGCATTTGA CTGGCTAGAA ACGGCTGACG GTAAAGTGTC TCTCAGAGGA
AGTAACGGTC TGTTCATCTC TTCTGAGAAC GGTGCTGCTG CAATGACCTG CACCCGTCCT
ACAGCCAGTG GCTGGGAAGC ATTCGGTTAC AGCGTAGTCG GTAATGCACA GGATGTTCCT
GACCAGGAGG GGCCGACTGC GGCGCCAGGT CAGTTTAAAG TTGTAGGTTA CTGGCCAGGA
TGGGCGGGTA GTCCCAGCAC CAGCAAAGTG CCTTATAACA AGCTGACAAA TGTGAACTAT
GCGTTCCTCC TGCCAAACAA CGATGGTACC CTGCAGGGAC TTGACAATCC AACCGCGTTA
CGCGCGCTGG TAACCCAGTC ACACGCTGCC GGTGTTAAAG TATCGATCTC TATCGGCGGA
TGGAACAATG GTAACGATCA GGGCTTTGAA AACCTGGCAC GTAATGCGTC TACCCGTACC
ACTTTCGTGA ACGCTGTGAT TGCATTCGTA AACCAGTATA GCCTTGATGG CGCTGATATT
GACTGGGAAT ATCCTGACAA TGGTGCTTCT GCTGACAACT ACGTATTGCT GATGACAGAA
CTTTCCACTC AGCTGCATGG CCGTGGTAAA CTGCTTACAG CTGCTGTAGT CGGTGAAAAC
GGAGCAAGTA TCCTGAGTAG CGTATTCCCG CTGGTGGATT ACCTGACACT GATGGCATAT
GATGAAAACG ATTATCAGCA CTCTACCTAT AGTTATGCAC AGCGTTCGCT GAACTACTGG
AGAGGTCGTG GTTTGCCAAA AGAAAAAGCC ATCCTGGGTG TACCATTCTA TGGCCGTCCC
AGCTGGGAAT CTTACGCGCA GCTGCTGGCC AGAGGTGCAA GTCCAAACGC GGACACTTAC
CAGGGCGTAG GTTACAATGG TATACCTACT ATCAAGGCGA AAACTAACCT GGCATTCGAC
CAGGGTGGTG GTATCATGAT CTGGGAACTG TCACAGGATG TTACCGGTGC GAACTCCCTC
CTGAACGCGA TCAACCAGGT TGTACTGCAG AGAGGCGATA CGACCGTAAC AAACCCGAAT
CCGACGACTG TACCGATCGG TAAAACGATC TGGTTACAGG GCTTTAACAG CAAATACGTT
AATTCAAGAA ACGGACAGGG TGCTATGTGG TGTGATTCCG ATACTCCGCA GGCATGGGAA
CTCTTTACTG TCATAGATGC GGGTAACGGT AAGATCGCGC TGAGAGGTAA CAACGGTCTG
TATGTTTCTT CTGAAAATGG CGAACAGGCA ATGACCTGCA ACAGACCTGC TATTGACGGA
TGGGAAGTAT TCGACTGGAT CAGCAACAGT GATGGTTCCG TTTCCCTGCG TGGCAGCAAC
GGAATGTATG TTTCCTCCGA AAATGGTGAG CAGGCAATTA CTTGTAACAG ACCTGCTATT
GACGGATGGG AAAGATTTAA CTGGGCAGCA GCAACAGCAT TGACTGCGTC TTCAATCGCT
GCCGTACAAC AGGAAAAAAC AGCTGTGAGT ATTGCTGCGA ATGGCAGTCT GCTGATATAT
CCTAACCCGG TAATGAAAGG TAGTACGCTG ACCGTTAACG TGAAAAAATA CAACGCAGCC
GCTCCGGTAC ACGTATCGGT AGTAGATGTG AATAAGCGGG TAGTAGCTTA TAAGAAAGCC
AACGCCGCAG TAGTGACATT ATCTACAGGC AATATGGCCG GTGGTTTCTA TATATTGACT
GTTACCAATG GTAATAACAT ATTTACCAGC AAGGTACTGA TTCAGTAA
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| Protein sequence | MKIHYTNRLC IPQSMRQLRL FCTLLLLLLC LGAEQAFSQL SRLRADGKRI VNASNQEVIF
KGINVGGWLL QEGYMIKPSF SGGGTQWSIK KRLYDQGQSD AAVEAFYQSW RDNFITKADI
DYLASQGFNS VRLPLHYDLF LTAAQRAVRN GVARNASTYN SYVSSLTTWY NNNQLFNDQN
LEGFRLTDSL LKWCAANNMY VVLDLHAAPG AAGTDANISD ALMGNDLWNK PIYQDITVRL
WQRISARYIN DDRVGFYDLI NEPNNVPANQ SIHSLFERLI NAIRAQGDTH LLMVEGNGWG
NQYNYLEPFT FTNRSNLVYN AHRYGTSTST TTTNGDANQI NELGNINNFR NTHNVPVVVG
ETGENNSNWL RANIAAMNAA GVGWFHWTYK RFDGGENAAL LRIPPPYLMD GAGNMSAVLN
NIRFANNVKN TNTIAAVAPG RSSANAPVGK TIWLQGFNNK YVNSKNGQGA MWCDSDAPQA
WELFTVVDAG NGKIALRGNN GMYVSSENGE QAITCNRPAI QGWEAFDWLE TADGKVSLRG
SNGLFISSEN GAAAMTCTRP TASGWEAFGY SVVGNAQDVP DQEGPTAAPG QFKVVGYWPG
WAGSPSTSKV PYNKLTNVNY AFLLPNNDGT LQGLDNPTAL RALVTQSHAA GVKVSISIGG
WNNGNDQGFE NLARNASTRT TFVNAVIAFV NQYSLDGADI DWEYPDNGAS ADNYVLLMTE
LSTQLHGRGK LLTAAVVGEN GASILSSVFP LVDYLTLMAY DENDYQHSTY SYAQRSLNYW
RGRGLPKEKA ILGVPFYGRP SWESYAQLLA RGASPNADTY QGVGYNGIPT IKAKTNLAFD
QGGGIMIWEL SQDVTGANSL LNAINQVVLQ RGDTTVTNPN PTTVPIGKTI WLQGFNSKYV
NSRNGQGAMW CDSDTPQAWE LFTVIDAGNG KIALRGNNGL YVSSENGEQA MTCNRPAIDG
WEVFDWISNS DGSVSLRGSN GMYVSSENGE QAITCNRPAI DGWERFNWAA ATALTASSIA
AVQQEKTAVS IAANGSLLIY PNPVMKGSTL TVNVKKYNAA APVHVSVVDV NKRVVAYKKA
NAAVVTLSTG NMAGGFYILT VTNGNNIFTS KVLIQ
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