Gene Cpin_2560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2560 
Symbol 
ID8358719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3129238 
End bp3129459 
Gene Length222 bp 
Protein Length73 aa 
Translation table11 
GC content33% 
IMG OID644964742 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003122244 
Protein GI256421591 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAA AAAAGAAATT GAATAGAATA AAAGATGTTT TGAGACAACA AGGAAGAACT 
CAAACATGGC TCGCTGAGAA AATCGGCAAG AGTTACGTTG TTGTTACAAA TTATTGTAAT
AATAACAGCC AACCCAGCAT CGAGATACTA AAAAAAATCG CTGATGTAGT AGGTGTAGAC
GTAAGAGAAT TATTAGAACC TTCAAAACCC AATCCTATAT AA
 
Protein sequence
MSEKKKLNRI KDVLRQQGRT QTWLAEKIGK SYVVVTNYCN NNSQPSIEIL KKIADVVGVD 
VRELLEPSKP NPI