Gene Cpin_2521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2521 
Symbol 
ID8358680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3097913 
End bp3098311 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content41% 
IMG OID644964704 
ProductNUDIX hydrolase 
Protein accessionYP_003122206 
Protein GI256421553 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.28701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCA TTGACAAACT CGCCTGGATT GAAATAAAAG ACGGCGCCAT CCTCTCCACG 
AGAAGTTATG GTAAGGATAA ATACTATATT CCCGGAGGAA AACGAGAAGA TGGTGAGACC
GATGCACAGG CATTATGCAG GGAAATAAAA GAAGAATTGA GTGTTGACCT GCATATAGCC
ACACTGCAAT TGGTAGGTAT CTTTCAGGCA CAGGCGCATG GACATACAGC AGGCATTGAA
GTAAAAATGA CATGTTATAC GGCTGAATAT TCAGGTGAGA TCAGCGCTGC TGCAGAAATT
GAGGAAGTCA GATGGTTACA GTACATCGAT AAAGACAAGA TTTCCGAAGT AGATAAATTG
ATATTCGATT TTTTAAAAGA AAAGCAACTG ATTCGTTGA
 
Protein sequence
MKLIDKLAWI EIKDGAILST RSYGKDKYYI PGGKREDGET DAQALCREIK EELSVDLHIA 
TLQLVGIFQA QAHGHTAGIE VKMTCYTAEY SGEISAAAEI EEVRWLQYID KDKISEVDKL
IFDFLKEKQL IR