| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2421 |
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| Symbol | |
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| ID | 8358576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2976940 |
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| End bp | 2979849 |
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| Gene Length | 2910 bp |
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| Protein Length | 969 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644964607 |
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| Product | glycosyl hydrolase 38 domain protein |
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| Protein accession | YP_003122113 |
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| Protein GI | 256421460 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0383] Alpha-mannosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.433161 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATATAC ATATTATGAA TAGGCTAAAA CGATGGTATA CAGACAAATA CTGTCTGCTG
CTGCTGGCCG TAATGACCAT AGATCTGGCC CATGCACAGC AAACGCCTGC TTTTACGTCT
ATTGCCCTTC AACCGACCGT AGCTTATCTG AAACACCAGG GCCGTGCTGC CAGGATGGTC
AGACTGCTCT TTCATGGAGG CAATAGTTAT GCGCCCGCCA TGGCTTATAT GACTTTTAAC
GGCCTGTATG ATAGTATCCC GCTTGTGGCG ACTGAAAAAG GCATTGATAT ATTTGAACTG
CCTTTACCCG GTGGACCTGT ACACCACGAA ACACAGCTCT ATGTAAAAGT GAAATCCGGT
GGAAGGGAAT ATACCGCCCG TTGTATGGTA GCCCCTGCGC CGGAATGGAA AGTATACCTG
TTGCCGCATT CTCATGTGGA TATCGGGTAT ACCAATGTGC AGGAGAAAGT CATGCAATTG
CATATGAACA ATATTGACGA GGCCATCAAG ATTGCGGAAC GTACACAAAA CTACCCGCCG
GATGCCCGTT ATAAGTGGAA TACAGAGGCT TTCTGGGTAG TGGATCACTA CCTGGCTGCT
GCCGATGAAG CAAAGAAAAA AGCCTTCTGG GAAGCGGTTA AAAAGGGTTG GATCAATATT
GATGGCGCCT ACGCGAATAT CAATACCAGC GTGACAGATT CCCGTCAGCT GATGCAGATG
TTCTATACAG CGGTAAAGAC AGCCAAAGAC CACGGTCTTG ATATTAATAC CATGTTCCAG
GGCGACGTAC CCGGGGCTTC CTGGGGACTG GCCAGTCAGT CGGGTATAAC AGGGATCCGT
TATTTCTGGG GCGCGCCCAA TGCGGATGAT CGTATCGGTC AGTCGCCTGC ATGGAGAGAC
AGACCTTTTT ACTGGCAATC ACCCGGTCAG CAGAAAATGC TGTACTGGCA AAGCGAACCT
TATTCCATCG GTTACAGATT AAAAGGTAGC AAGATCCCTA ATTTCTTCAC GGTAGAAGAT
CCTGTACCTT ACTATACCGG TCATCCTTCT GAGAACTTCC TGAATCCTTA TCTGTTCGAT
TACCTGGCAG CACTGGACAA AAAGAAGTTC CCCTACAACA TGACTATCAT GACATGGGCG
ATGAGTGATA ATGCACCGAT TGATCCGGAA CTGCCGGAAG CCGTGAAAGC ATGGAATGAA
CGTTATGCAT CACCCAGATT GGTTATTACT TCCGTAAAAC AATTCTTCAA CGATTTTGAA
GCTGCCTATG CAGACAGAAT ACCGGTAGTA TCCGGTGATT ATACAGAGTT CTGGACAGAT
GGTATTGCTT CTGCTGCCAG AGAAACAGGG TACAACAGGA ATGCTTCAGA AACACTGCAA
CAGGCAGATG CTGTATGGGC ATTACGTGGC AAAGCAGACT ATCCGGCGAC AGCCATAGAT
ACGATATGGA ATAACATCCT GCTGTTCAAT GAACATACCT GGGGCGCTTA TAACAGTATC
TCCAATCCGG AAGATCCCAA GGTGATTTCA CAATGGGGAT ATAAGCAGTC ATTCGCATTA
AAAGGACATG CGCAGTCTGC CGCTATGTTA ACATCCGCCA CCGGCGGAGA AGCCATTGCT
AATGCTGTTG ATGTATACAA TACCATTGGC GAAAACCGTA CAGAATTAGT ACGGATACCT
GCGGCACAAA GTACAGCCGG AGACCTGGTG AAAGATGTCA ATGGAAAGAA AGTGCCATCG
CAACGTCTCA GCACCGGCGA ACTGGCCATA CTGGTACAAC ACATTGCACC ATATGCTAAA
CAACGCTTTA CCATACAGGC AGGAAAGGCT TATAGCAACA CGAAATCAGT TGTCAGCAAT
ACCACCCTGC AAAATGAGCT GTATAAGATA TCACTCAATG CGCAAACAGG TAATATCGAC
AAACTGGAAC GTAGTGGTAT TCCCCATAAT CTCGCGGATT CCGGTGGATT GAACCGTTAC
TCTTATCTGC CTGGTGATTC ATTGGAACAT ATTGCATATG CAGGTCCGGC GACAATCACC
GTAAAAGAAA AAGGTCCGCT GGTAGTGAGT GTAATTGTGA CAGCGGTAGC TCCCGGTGCT
AATGAACTCA CTACTGAAAT AATGCTGGTA GCAGGTGAAG ACCGTGTACA GATCATCAAT
AACATCGATA AAAAAGCGAT TACAAAGAAA GAAGGCGTAC ACTTCGGATT CCCTTTCAAT
GTAGCAGATG CGCAGGTCAG ATATAGTATT CCCTGGGGCA GTATCAATGT TGAAGCAGAC
CAGTTACAAT ATGCCAACCG CAACTGGTAT ACCGTACAAC ATTGGGTGGA CGTATCCAAT
AAAGACTATG GTGTCACCTG GTCAACACCA GATGCGCCAT TGTTTGAAGT AGGGGCACAG
ACAACGGCAG GTCTTACCGG TGGATTACAT GATTCTCCTA AATGGATCAG TTTTACAGAA
CAGCATCCTG CTATCTATTC CTGGATAATG AACAACCTGT GGCATACCAA TTTCCGGCAC
GCACAGGAAG GACCGACTAC TTTTCGTTAT TACCTGACGG TACACCATAG CTATGATGCC
TATGCTGCGA ATCAACAGGG ACTGGCTAAT CACCGTCCGT TGATAGCTGC TCCGGCCAGC
GGTCCGGCAA CAGAGTCTTT GCCTTTTACC ATCAACTCCA AAGCAGTCTA CGTAGAGAGT
CTGAAACCTG CCGCTGATGG CAAAGGGGTG ATCGTATGGC TGGTGAATAC AGCGCCGGTT
GAAACAGGCG TTTCCTTCAA TACGAAAAGT AATGCTGCAA AACTGCAGAT CACAGCTACC
AATATGCTGG AAGAATATAA ACAGTCATTA GATAACAACA TCATCCTGCC TGCAAAAGGA
GTTATGATGG TACGTGTGGA AAACAAATAA
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| Protein sequence | MYIHIMNRLK RWYTDKYCLL LLAVMTIDLA HAQQTPAFTS IALQPTVAYL KHQGRAARMV
RLLFHGGNSY APAMAYMTFN GLYDSIPLVA TEKGIDIFEL PLPGGPVHHE TQLYVKVKSG
GREYTARCMV APAPEWKVYL LPHSHVDIGY TNVQEKVMQL HMNNIDEAIK IAERTQNYPP
DARYKWNTEA FWVVDHYLAA ADEAKKKAFW EAVKKGWINI DGAYANINTS VTDSRQLMQM
FYTAVKTAKD HGLDINTMFQ GDVPGASWGL ASQSGITGIR YFWGAPNADD RIGQSPAWRD
RPFYWQSPGQ QKMLYWQSEP YSIGYRLKGS KIPNFFTVED PVPYYTGHPS ENFLNPYLFD
YLAALDKKKF PYNMTIMTWA MSDNAPIDPE LPEAVKAWNE RYASPRLVIT SVKQFFNDFE
AAYADRIPVV SGDYTEFWTD GIASAARETG YNRNASETLQ QADAVWALRG KADYPATAID
TIWNNILLFN EHTWGAYNSI SNPEDPKVIS QWGYKQSFAL KGHAQSAAML TSATGGEAIA
NAVDVYNTIG ENRTELVRIP AAQSTAGDLV KDVNGKKVPS QRLSTGELAI LVQHIAPYAK
QRFTIQAGKA YSNTKSVVSN TTLQNELYKI SLNAQTGNID KLERSGIPHN LADSGGLNRY
SYLPGDSLEH IAYAGPATIT VKEKGPLVVS VIVTAVAPGA NELTTEIMLV AGEDRVQIIN
NIDKKAITKK EGVHFGFPFN VADAQVRYSI PWGSINVEAD QLQYANRNWY TVQHWVDVSN
KDYGVTWSTP DAPLFEVGAQ TTAGLTGGLH DSPKWISFTE QHPAIYSWIM NNLWHTNFRH
AQEGPTTFRY YLTVHHSYDA YAANQQGLAN HRPLIAAPAS GPATESLPFT INSKAVYVES
LKPAADGKGV IVWLVNTAPV ETGVSFNTKS NAAKLQITAT NMLEEYKQSL DNNIILPAKG
VMMVRVENK
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