Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2414 |
Symbol | |
ID | 8358569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 2970477 |
End bp | 2971079 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644964600 |
Product | hypothetical protein |
Protein accession | YP_003122106 |
Protein GI | 256421453 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00265902 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.422792 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATTTGA TACTAACAGC ACAGATAACG GAGAAATATG TAGTTGATCT TTATGAACGG CTGACGCCTT CCTCCCTGCT ATACCATAAT TTATCCCATA CGCAGAAGGT GGTAGCGCAC GCAACAGAGA TCGCCACTTA TTACCAGCTG GACGAACAGA CTTTATTTAT CATAAAAGCA GCCGCATGGT TTCATGATAC CGGTCACCTG GTAGCGGAAA TGGCCGTACA TGAGGCAGCC AGCGTCAACC TGATGCGCAC CTTTATGGAA ACGCAGCAGA TCAGTGATAC ACTCATAGAC GAGATCTCCC GTTGCATCAT GGTAACGCGC TTCCCTTCTC ATCCGCAAAC ACTTCCCGAG TCAATTATTT GTGATGCAGA TACTTATCAC TTCGGAACGT CCGAATTTAA AATAACGGAC GACCTGGTGA GAGAAGAATT TCAACTAAGA CTATGCAGGC AATTTCCTGA CTGGTACGAA GGAGCTTTGG GGTTATTGAA GTCCCATCAT TTCTTTACTA CCTACTGTCA AAAAAAATTA GATAGTGGAA AATTTAATAA TATTTTATAT ATTGAAAAAA AATTAGAAAA CAGATCTGTC TGA
|
Protein sequence | MDLILTAQIT EKYVVDLYER LTPSSLLYHN LSHTQKVVAH ATEIATYYQL DEQTLFIIKA AAWFHDTGHL VAEMAVHEAA SVNLMRTFME TQQISDTLID EISRCIMVTR FPSHPQTLPE SIICDADTYH FGTSEFKITD DLVREEFQLR LCRQFPDWYE GALGLLKSHH FFTTYCQKKL DSGKFNNILY IEKKLENRSV
|
| |