Gene Cpin_2414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2414 
Symbol 
ID8358569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2970477 
End bp2971079 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content42% 
IMG OID644964600 
Producthypothetical protein 
Protein accessionYP_003122106 
Protein GI256421453 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00265902 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.422792 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTGA TACTAACAGC ACAGATAACG GAGAAATATG TAGTTGATCT TTATGAACGG 
CTGACGCCTT CCTCCCTGCT ATACCATAAT TTATCCCATA CGCAGAAGGT GGTAGCGCAC
GCAACAGAGA TCGCCACTTA TTACCAGCTG GACGAACAGA CTTTATTTAT CATAAAAGCA
GCCGCATGGT TTCATGATAC CGGTCACCTG GTAGCGGAAA TGGCCGTACA TGAGGCAGCC
AGCGTCAACC TGATGCGCAC CTTTATGGAA ACGCAGCAGA TCAGTGATAC ACTCATAGAC
GAGATCTCCC GTTGCATCAT GGTAACGCGC TTCCCTTCTC ATCCGCAAAC ACTTCCCGAG
TCAATTATTT GTGATGCAGA TACTTATCAC TTCGGAACGT CCGAATTTAA AATAACGGAC
GACCTGGTGA GAGAAGAATT TCAACTAAGA CTATGCAGGC AATTTCCTGA CTGGTACGAA
GGAGCTTTGG GGTTATTGAA GTCCCATCAT TTCTTTACTA CCTACTGTCA AAAAAAATTA
GATAGTGGAA AATTTAATAA TATTTTATAT ATTGAAAAAA AATTAGAAAA CAGATCTGTC
TGA
 
Protein sequence
MDLILTAQIT EKYVVDLYER LTPSSLLYHN LSHTQKVVAH ATEIATYYQL DEQTLFIIKA 
AAWFHDTGHL VAEMAVHEAA SVNLMRTFME TQQISDTLID EISRCIMVTR FPSHPQTLPE
SIICDADTYH FGTSEFKITD DLVREEFQLR LCRQFPDWYE GALGLLKSHH FFTTYCQKKL
DSGKFNNILY IEKKLENRSV