Gene Cpin_2401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2401 
Symbol 
ID8358556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2955925 
End bp2956389 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content49% 
IMG OID644964587 
Productphosphatidylglycerophosphatase A 
Protein accessionYP_003122093 
Protein GI256421440 
COG category[I] Lipid transport and metabolism 
COG ID[COG1267] Phosphatidylglycerophosphatase A and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.235781 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.154046 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGAA TTCACAAAAT ATTCGCTACC AGCCTGGGTA TAGGCTACAT CGGCAAAGGC 
GGGGGCACAG TCGCAGCGGC TGTGGCAGCG CTCTGCTGGT ACCTTGCACT GGCTGGTAGT
GCATTTGCAG GCCTTTGGCC ATTAGTATTC ACCGTAGCCA TCACCGTGCT CGGTATCTGG
TCCGGTAATG AAGTAGAGCC TTACTGGGGT AAGGATGATA AGAAAGTAGT GATAGATGAA
GTGGCCGGTA TGTGTGTCAG TCTGCTGTTT TTACCGGTAA ATTACTGGTA TGTGCTGGCC
GGACTGGTAT TATTCAGATT CTTTGATATC GTTAAGCCAT TAGGCATCCG CCGCACCGAA
CAACTGAACG GTGGTCTGGG GGTAATGATG GACGACGTGG TAGCAGGGAT ATATACAAAC
TTGTTACTGC AGATTGCCTA TCACAGTAAC CTTTTTGGAG GATGA
 
Protein sequence
MIRIHKIFAT SLGIGYIGKG GGTVAAAVAA LCWYLALAGS AFAGLWPLVF TVAITVLGIW 
SGNEVEPYWG KDDKKVVIDE VAGMCVSLLF LPVNYWYVLA GLVLFRFFDI VKPLGIRRTE
QLNGGLGVMM DDVVAGIYTN LLLQIAYHSN LFGG