Gene Cpin_2400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2400 
Symbol 
ID8358555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2954603 
End bp2955928 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content48% 
IMG OID644964586 
ProductInositol-3-phosphate synthase 
Protein accessionYP_003122092 
Protein GI256421439 
COG category[I] Lipid transport and metabolism 
COG ID[COG1260] Myo-inositol-1-phosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.663346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.130983 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACATC AAATTAAAGA AGCAAAAGGT AAGCTGGGTG TTTTGATGCC AGGCCTTGGC 
GCGGTGGCCA CAACATTCAT CGCCGGGGTA GAGGCAGTTA AGAAGGGATT AGCACAGCCC
ATCGGTTCCG TCGCTCAGAT GGGACATATC CGACTGGGTA AAAGAACTGA CAACAGGAAC
CCGCTGATCA AAGACTTTGT GTCTTTAGCA AGTCTGAATG ATCTGGTATT TGGTGGTTGG
GATGTATACG AAGACAACGT ATACACAGCA GCTGTAAAAG CTGAAGTGCT GGACAGATTC
CAGCTGGAAG CGATCAAACC TGAACTGGAA GCCATTGTTC CAATGAAGGC CGCTTTCGAT
AAAAACTTTG TTAAAAATCT TGACGGTACA CACGTTAAAG ATAACAAAAC CCGTTACGAG
CTGGCACAGG CCGTAATAGA AGATATTAAG AATTTCCAGA AAGAAAAAGG CTGCGACCGT
GTTGTAATGG TATGGTGCGG TTCTACCGAG ATCTATCACG AAGCGGCAGA CGTACATATG
TCCCTCGCGG CTTTCGAACA GGGTCTGAAA GATAACGACC TGCGTATCGC GCCGAGCATG
ATCTATGCTT ATGCAGCGTT AACATTAGGT GTTCCTTTCG CAAACGGTGC TCCTAACCTG
ACCTGCGACA TCCCTGCCCT GATCGAACTG TCTAAAAAGA CAAAAACTCC GATCGCAGGT
AAAGATTTCA AAACCGGACA GACCCTGATG AAGACCATCC TGGCTCCAGG TCTGACTGCA
CGTGCACTGG GTATGGAAGG CTGGTTCTCC ACCAACATCC TGGGTAACCG TGACGGATGG
GTACTGGACG ATCCGGATAA CTTCAAAACC AAAGAAGTTT CCAAGCTGGG CGTACTGGAA
GACATCCTGC TGCCGGAAGA AAATCCTGAA CTGTATGGTG ATATGTACCA CAAGATCAGG
ATCAACTATT ATCCTCCACG CAAGGATAAT AAAGAGAGCT GGGATAACAT TGACATCATC
GGCTGGATGG GCTACAAAAT GCAGATCAAG ATCAACTTCC TCTGCCGTGA CTCCATCCTG
GCTGCGCCAA TCGTTCTGGA CCTCGCACTG TTCATCGACT TCGCTAAACG CGCAGGTATG
AGCGGTATCC AGGAATGGCT GTCTTTCTAT CTGAAGTCTC CGCAAACAGC TCCAGGTCTG
CGGCCTGAGC ATGACATCTT CAAACAGCTC ATCAAACTGC AGAATACACT GCGTTACCTG
ATGGGTGAAG ATCTGATCAC GCACCTGGGT CTGGATTATT ATGAAGGTAT TTTAAACGAA
GAATGA
 
Protein sequence
MKHQIKEAKG KLGVLMPGLG AVATTFIAGV EAVKKGLAQP IGSVAQMGHI RLGKRTDNRN 
PLIKDFVSLA SLNDLVFGGW DVYEDNVYTA AVKAEVLDRF QLEAIKPELE AIVPMKAAFD
KNFVKNLDGT HVKDNKTRYE LAQAVIEDIK NFQKEKGCDR VVMVWCGSTE IYHEAADVHM
SLAAFEQGLK DNDLRIAPSM IYAYAALTLG VPFANGAPNL TCDIPALIEL SKKTKTPIAG
KDFKTGQTLM KTILAPGLTA RALGMEGWFS TNILGNRDGW VLDDPDNFKT KEVSKLGVLE
DILLPEENPE LYGDMYHKIR INYYPPRKDN KESWDNIDII GWMGYKMQIK INFLCRDSIL
AAPIVLDLAL FIDFAKRAGM SGIQEWLSFY LKSPQTAPGL RPEHDIFKQL IKLQNTLRYL
MGEDLITHLG LDYYEGILNE E