| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2392 |
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| Symbol | |
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| ID | 8358547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2943668 |
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| End bp | 2946895 |
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| Gene Length | 3228 bp |
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| Protein Length | 1075 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644964578 |
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| Product | hypothetical protein |
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| Protein accession | YP_003122084 |
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| Protein GI | 256421431 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.299711 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.167741 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGGCA AGACGCGAAA GAGGATCCTC CGTATCTTAT TAATACCTGT TGCTATATTG
ATAATATTGG CCGGCATTGC GGTCGGGGTG CTTTACTCCC AACAGCAGCG CCTGATTAAC
CTGGCAATCA AAGAATTAAA TAAGCAATTA CCCGGAGAAT TGGTGATCGG AGGAAGTATG
ATATCTCCTT TCCAGAATTT CCCTTACATC TCTATCGGAC TGAAAGACGT GAAGTTTTTT
GCCACCAAGC AAAAGACCGG TCGTCCCATG TACCAGCTTG AAAAGCTGTA TGTAGGGTTC
AGTCTGCCGG ATATTCTCCA ACAGAAATAC AATGTCAAGG TGATCTTTCT TAAGAAAGGG
CACCTGGACC TGGTCAGAGA TAATAATGGT AACCTGAATA TCGTGGAAGC CAACAGGATC
CAGCAGGACA CTATTGCAAC AGCTGCCGCT GAATCTGCTG CCCTGGACCT CGATATAAAA
AAGATCGTAT TGAGCGAACT GGAAATTTCC TTTACGGACA GACCCAGCGG TCAGCATGTC
AATGCCCGTA TCAGTAAGAT CAAAACGTCT TTCCGTGCGG CTGATAATAA GATCTTTGCA
GACTTTACCG GTGGTATGGT CGCTGACTAT ATCACCCCCA AAGATTCCTC CCTCTTCCGT
AATAAACACC TGAACGCAGA TTTTACCGTT ACCTACGATC AGACAAAGGA ATTCGTTACC
CTGACAAAGG GTAACCTGAA ACTGGAGGAC TTCAGTTTCA GCGTTTCCGG TACGGCAGAC
CTGAAAAATG GTAATAACGT TGATTTCAAA ATCAAAGGTG ATAAACCGGA TATCGGACAA
CTGATGTCTT TTGCACCTGC CTCCGTAGCG GACCAGGTGA AACAGTTCAA GTATGACGGA
CGGCTGTATT TCGACGGACT GGTTAAAGGA AAGCTTGCCG GCGAACAAAT GCCATTGATC
CAGGTGAATT TTGGCTGCGA AAACGGCTGG CTGATGAACC CTGACGCCAA GAAAAGGATT
GATTCCCTTG GTTTTAAAGG CTATTATACC AATGGTGCGG AACATTCCCT GAAAACATCA
GAACTGCACC TGATGAATAT GAGCGCTATT CCTGAAAAAG GCATCTTTAA AGGGAACTTC
GTCATGAAGG ACTTTACAGA TCCTAAAATG ATCATGCAGA TCAATTCGGA ACTTGAGCTG
GAATTTATCG GCGCTTTCCT GGGTATAGCT GACCTGCAGC GTATCACTGG TCATATCAGC
ATGAAGATGG ACTTTAATGA ACTGGTGGAT ATGACACTGC CGGAAGCATC CATGGGCAAA
TTAAAAGAAG GTATCCAGAG TGAACTGAGA GTAAGCGACC TGACCTTCCG TATTCCTAAC
TATCCGCATA TCATCCATAA ACTGAATCTT CATGCAGACA TGAAGAATGG TTTTGTGAAA
CTGGATACAC TGTCTTTCTT CTTCGGTAAT TCTGATTTTG CGATGAACGG TTCCCTGAGC
GATCTGCCTG CCCTTTTCCA TCAACAGGAA AAACCGGTAC AGGTCACATT CACTGCCCGT
AGTAAAAGGA TGATCATGAA GGAGTTGCTG TCATATGATA CAGCGATGGC CAGAAAGGCA
AAAGAAGAGA TCTATAACTT CAATATCGGT CTGGCACTGG AAACTTCCGT GAAGGAACTG
CAACATCCGA ATCCATTGCC TAAAGGCAAA TTTAAAATGG AGAAACTGTT TGCCAGTTTC
AAGGAGTATC CACATGCTTT CCATGATTTC GGCGCAGAGC TGAATATCAA CGATACAGCT
TTATTGCTGC GCAATTTTGG TGGTATGATT GATAGCAGTG ATATCCGTTT CAGTGGTCGT
GTGATCAACT ATCAGCTGTG GTTTGACAAG ATCATGAGAG GAAAGACACA GGTGGCATTT
GACCTGAAAT CACAGCGTCT GGCCATGAGA GACGTACTCG GTCCTATCAG TAAGAAATAT
ATATCCAGGG ATTATCACCA GGAAGTCGCT TCCGGTCTCT GGTTACGTGC GAAAGCAGAC
CTGCGCTATG ATTCTGTTTT CAAATTTGCC AAAATAAAAC TGGCGAATGT TTCCGGTGAA
TTGCTGCAAC ATAAGATCAA GGTGGATAGT GTGAAGGGGA CTGTAAAAGT AGGTGCAGAC
AGCTTCCTGA GACTGGATAC ACTCACCGGC CGTATAGGTA AGACAGACTT TGATATCAGT
ATGCGTTTAT ACATGGGTAA GGATACGGTG AAACGAAAGA AGGAGAATTT CTTACAGTTT
ACTTCCCGCA ACCTTGACCT GGACCAGCTG ACGAACTATA AACTGACGGC CAATGAAGAT
GAAGAGACTG TAGTAGCAGC GCCTGCAGCG ACGCGTACAG TGGTAAGAGA TACTTCACAT
GCCAGCAGCT TTAATATCTT CAATATTCCA TTCATTGACT TCAGGGCTAC CGTGAATATC
GGCAGGGTGA AATACCATCG TCTGTGGCTC CGGAATATCG TTTCAAATGT GCGTATGCAG
GCCAATCAGC ATCTTTACCT GGATACCCTG GGAATGGGTA TTGCAGATGG GCAGATCGGT
ATGAGAGGAC ATTTCAATGG TACTGATCCT AAGAAGATCT TCTTCCGCAG CAGGATCCGT
GCGTTTGACG TAGACCTGGA AAAACTGATG CTGAAACTGG ACCACTTCGG ACAGGACTAT
GTGATCAACA AGAATATAAA AGGCCGTCTC AACGGGCAGA TCAGAAGCCG TATACAGATG
CATCCGGACC TGACGCCTAT CATTGATAAT TGCGAAGCGG AACTGGACCT GGGCATTTAT
AATGGCAGTC TGGTAAACTT TGCACCCATG CAGGCAATGG CGGGTTATTT CAAAGATAAG
AACCTGAACA TGGTGCGTTT TGATACATTG AGGAATAAAC TGAGTCTGAA AAATGGCGTC
CTGAATATTC CGAACATGAA TATCAACTCG TCACTGGGCT TTATGGAGAT CTCAGGTAAG
CAATCACTGG ATATGAACAT GGAATACTAT ATGCGTATTC CGTTGAAGAT GGTGACAACG
GTTGGTTTCC AGTCTTTATT CGGCAGAAAG AAAGAAGAAG TGGATCCTGA CCAGGTAGAC
GCCATTGAGT ATCGCGACAA GGATAAAAAG GTGCGTTTTA TGAATATCAA GGTAACAGGT
ACGCCGGATA ACTTCAAAGT AGGACTGGGT AAGGCTAAGA AAGCGTAA
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| Protein sequence | MTGKTRKRIL RILLIPVAIL IILAGIAVGV LYSQQQRLIN LAIKELNKQL PGELVIGGSM
ISPFQNFPYI SIGLKDVKFF ATKQKTGRPM YQLEKLYVGF SLPDILQQKY NVKVIFLKKG
HLDLVRDNNG NLNIVEANRI QQDTIATAAA ESAALDLDIK KIVLSELEIS FTDRPSGQHV
NARISKIKTS FRAADNKIFA DFTGGMVADY ITPKDSSLFR NKHLNADFTV TYDQTKEFVT
LTKGNLKLED FSFSVSGTAD LKNGNNVDFK IKGDKPDIGQ LMSFAPASVA DQVKQFKYDG
RLYFDGLVKG KLAGEQMPLI QVNFGCENGW LMNPDAKKRI DSLGFKGYYT NGAEHSLKTS
ELHLMNMSAI PEKGIFKGNF VMKDFTDPKM IMQINSELEL EFIGAFLGIA DLQRITGHIS
MKMDFNELVD MTLPEASMGK LKEGIQSELR VSDLTFRIPN YPHIIHKLNL HADMKNGFVK
LDTLSFFFGN SDFAMNGSLS DLPALFHQQE KPVQVTFTAR SKRMIMKELL SYDTAMARKA
KEEIYNFNIG LALETSVKEL QHPNPLPKGK FKMEKLFASF KEYPHAFHDF GAELNINDTA
LLLRNFGGMI DSSDIRFSGR VINYQLWFDK IMRGKTQVAF DLKSQRLAMR DVLGPISKKY
ISRDYHQEVA SGLWLRAKAD LRYDSVFKFA KIKLANVSGE LLQHKIKVDS VKGTVKVGAD
SFLRLDTLTG RIGKTDFDIS MRLYMGKDTV KRKKENFLQF TSRNLDLDQL TNYKLTANED
EETVVAAPAA TRTVVRDTSH ASSFNIFNIP FIDFRATVNI GRVKYHRLWL RNIVSNVRMQ
ANQHLYLDTL GMGIADGQIG MRGHFNGTDP KKIFFRSRIR AFDVDLEKLM LKLDHFGQDY
VINKNIKGRL NGQIRSRIQM HPDLTPIIDN CEAELDLGIY NGSLVNFAPM QAMAGYFKDK
NLNMVRFDTL RNKLSLKNGV LNIPNMNINS SLGFMEISGK QSLDMNMEYY MRIPLKMVTT
VGFQSLFGRK KEEVDPDQVD AIEYRDKDKK VRFMNIKVTG TPDNFKVGLG KAKKA
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