Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2379 |
Symbol | |
ID | 8358534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 2924354 |
End bp | 2925835 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644964565 |
Product | Rubredoxin-type Fe(Cys)4 protein |
Protein accession | YP_003122071 |
Protein GI | 256421418 |
COG category | [C] Energy production and conversion |
COG ID | [COG1773] Rubredoxin |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.883563 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAGAT ATACACAGAC CGTCAGCATT AATTTCACCG GGGGAATTAT TTCTCCTGGT CAGCTGCTGA CCATCCTTGA TATAGCGGAA GCATCTCGGG TGACACAGGT ACGTTTCGGC CTGCGGCAGC AATTGCTGAT GGAAGTACAG GGTAAATATG TTGAACAGTT TGAGGCAGAT TGTGCGCGTG AACAGGTCAG CTGGCATAGC TATGGTACTG CGCCTAATAT TACCAGTTCC TATCCCGGCG CCGGTATCTT CATTAATGAA GGCTGGCTTA CAGAAGGGAT TTATAAGGAT GTATTCTCAC TGTTTGACTA TACGCCAACA TTGAAAATCA ACATCTGCGA CAACAAACAG ACCTTCACCC CTTTCTTTTC AGGGCATATC AACTGGATTG CCGCAGGTGC TGCACATTAC TGGCACCTGT TTATCCGTTT CCCGAAAAGC AGCCGCCTGT TCGCCTGGCC TGATCTGATC TACACCAATA ACATCGCGCA GCTCAGCCAG TGTATTGAAT CAGTACTGGC AGCTACACCC GACATCAGCA ATGAAGCCTT ATATACGGCG GTAAAGGGAC AACTGGAATA CAACAGCAAA CCAGTAACGA CCGAACTGGA ACTACCAGCC TTCCATCTGC CTTATTATGA AGGATTTAAC CGGCATGAGA ATCATTACTG GTTAGGTATC TACCGGCGTG ACGAGGAATT CCCGGTAGCA TTCCTCCGCA ACCTGTGCAA TATCTGCCTG GAAACAAAGA CAGGACAACT ATACGCCACT TCCTGGAAGT CGCTTATCAT CAAAAACATT GCACCAGAGC ACAGAAGACT ATGGGATTAT ATTCTTGGTA AATACGGGAT CAATGTGCGT CATGCCGCCA ATGAACTCAA CTGGCATGTG GAAGACGACA GTGAAGATGC CCTGATCATC AAAAGACATA TCATCCGGCA TTTTGATAAT GCCGATGTCA GAACATATGG CTTATGCTTC AGTATCCGGA TCAATCCGGG TAATAACTGC TTCGGTTCCA TTGTGATCAG TAAACAGGAA GACAAATACA AAAGCCGGCT GAAGGGACAT CATCGTTACG ACATTCTCTA TACACAGGAT TTTAACCCCA ATTCCGGCAC CTTATTACCT TACCGCACAG GAGTAGCCAA AGAACATCTT GGGCCCTATA TCACGTCCTT ATGCAGGGAA TTCTATGACA ACAGCGCACC GACGGATCCG CTGCTCAGTT ATGTAGCTGG TCAGCAGACA GTTACGGCCA TAGCTCATAC AGAGAAAGCG GTGCATCAAT GTACACGCTG TCTGACAGTT TATGACGAAA CTATCGGCGA CCCCGATCAG GGAATTGCGC CAGGGACGGC GTTTCCAGTC CTTCCAGCTA CTTATCACTG CTCACTTTGT GACGCACCAC GGGAAAGTTT TACCACTGTC CCTGCAACTT CACTGGGATG GCTGGCCGGC ACACAGGATT AA
|
Protein sequence | MSRYTQTVSI NFTGGIISPG QLLTILDIAE ASRVTQVRFG LRQQLLMEVQ GKYVEQFEAD CAREQVSWHS YGTAPNITSS YPGAGIFINE GWLTEGIYKD VFSLFDYTPT LKINICDNKQ TFTPFFSGHI NWIAAGAAHY WHLFIRFPKS SRLFAWPDLI YTNNIAQLSQ CIESVLAATP DISNEALYTA VKGQLEYNSK PVTTELELPA FHLPYYEGFN RHENHYWLGI YRRDEEFPVA FLRNLCNICL ETKTGQLYAT SWKSLIIKNI APEHRRLWDY ILGKYGINVR HAANELNWHV EDDSEDALII KRHIIRHFDN ADVRTYGLCF SIRINPGNNC FGSIVISKQE DKYKSRLKGH HRYDILYTQD FNPNSGTLLP YRTGVAKEHL GPYITSLCRE FYDNSAPTDP LLSYVAGQQT VTAIAHTEKA VHQCTRCLTV YDETIGDPDQ GIAPGTAFPV LPATYHCSLC DAPRESFTTV PATSLGWLAG TQD
|
| |