Gene Cpin_2379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2379 
Symbol 
ID8358534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2924354 
End bp2925835 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content48% 
IMG OID644964565 
ProductRubredoxin-type Fe(Cys)4 protein 
Protein accessionYP_003122071 
Protein GI256421418 
COG category[C] Energy production and conversion 
COG ID[COG1773] Rubredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.883563 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGAT ATACACAGAC CGTCAGCATT AATTTCACCG GGGGAATTAT TTCTCCTGGT 
CAGCTGCTGA CCATCCTTGA TATAGCGGAA GCATCTCGGG TGACACAGGT ACGTTTCGGC
CTGCGGCAGC AATTGCTGAT GGAAGTACAG GGTAAATATG TTGAACAGTT TGAGGCAGAT
TGTGCGCGTG AACAGGTCAG CTGGCATAGC TATGGTACTG CGCCTAATAT TACCAGTTCC
TATCCCGGCG CCGGTATCTT CATTAATGAA GGCTGGCTTA CAGAAGGGAT TTATAAGGAT
GTATTCTCAC TGTTTGACTA TACGCCAACA TTGAAAATCA ACATCTGCGA CAACAAACAG
ACCTTCACCC CTTTCTTTTC AGGGCATATC AACTGGATTG CCGCAGGTGC TGCACATTAC
TGGCACCTGT TTATCCGTTT CCCGAAAAGC AGCCGCCTGT TCGCCTGGCC TGATCTGATC
TACACCAATA ACATCGCGCA GCTCAGCCAG TGTATTGAAT CAGTACTGGC AGCTACACCC
GACATCAGCA ATGAAGCCTT ATATACGGCG GTAAAGGGAC AACTGGAATA CAACAGCAAA
CCAGTAACGA CCGAACTGGA ACTACCAGCC TTCCATCTGC CTTATTATGA AGGATTTAAC
CGGCATGAGA ATCATTACTG GTTAGGTATC TACCGGCGTG ACGAGGAATT CCCGGTAGCA
TTCCTCCGCA ACCTGTGCAA TATCTGCCTG GAAACAAAGA CAGGACAACT ATACGCCACT
TCCTGGAAGT CGCTTATCAT CAAAAACATT GCACCAGAGC ACAGAAGACT ATGGGATTAT
ATTCTTGGTA AATACGGGAT CAATGTGCGT CATGCCGCCA ATGAACTCAA CTGGCATGTG
GAAGACGACA GTGAAGATGC CCTGATCATC AAAAGACATA TCATCCGGCA TTTTGATAAT
GCCGATGTCA GAACATATGG CTTATGCTTC AGTATCCGGA TCAATCCGGG TAATAACTGC
TTCGGTTCCA TTGTGATCAG TAAACAGGAA GACAAATACA AAAGCCGGCT GAAGGGACAT
CATCGTTACG ACATTCTCTA TACACAGGAT TTTAACCCCA ATTCCGGCAC CTTATTACCT
TACCGCACAG GAGTAGCCAA AGAACATCTT GGGCCCTATA TCACGTCCTT ATGCAGGGAA
TTCTATGACA ACAGCGCACC GACGGATCCG CTGCTCAGTT ATGTAGCTGG TCAGCAGACA
GTTACGGCCA TAGCTCATAC AGAGAAAGCG GTGCATCAAT GTACACGCTG TCTGACAGTT
TATGACGAAA CTATCGGCGA CCCCGATCAG GGAATTGCGC CAGGGACGGC GTTTCCAGTC
CTTCCAGCTA CTTATCACTG CTCACTTTGT GACGCACCAC GGGAAAGTTT TACCACTGTC
CCTGCAACTT CACTGGGATG GCTGGCCGGC ACACAGGATT AA
 
Protein sequence
MSRYTQTVSI NFTGGIISPG QLLTILDIAE ASRVTQVRFG LRQQLLMEVQ GKYVEQFEAD 
CAREQVSWHS YGTAPNITSS YPGAGIFINE GWLTEGIYKD VFSLFDYTPT LKINICDNKQ
TFTPFFSGHI NWIAAGAAHY WHLFIRFPKS SRLFAWPDLI YTNNIAQLSQ CIESVLAATP
DISNEALYTA VKGQLEYNSK PVTTELELPA FHLPYYEGFN RHENHYWLGI YRRDEEFPVA
FLRNLCNICL ETKTGQLYAT SWKSLIIKNI APEHRRLWDY ILGKYGINVR HAANELNWHV
EDDSEDALII KRHIIRHFDN ADVRTYGLCF SIRINPGNNC FGSIVISKQE DKYKSRLKGH
HRYDILYTQD FNPNSGTLLP YRTGVAKEHL GPYITSLCRE FYDNSAPTDP LLSYVAGQQT
VTAIAHTEKA VHQCTRCLTV YDETIGDPDQ GIAPGTAFPV LPATYHCSLC DAPRESFTTV
PATSLGWLAG TQD