Gene Cpin_2370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2370 
Symbol 
ID8358525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2914598 
End bp2915605 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content43% 
IMG OID644964556 
Productacyltransferase 3 
Protein accessionYP_003122062 
Protein GI256421409 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3594] Fucose 4-O-acetylase and related acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.205285 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACCC AATCAAGAAT TGCATGGATC GATACCCTGA AGGGTATTGG TATTCTGACA 
GTAGTGGCCG GACATATATT TCCGGATGCT GTGTCCAGGT ACATCTTTCT TTTTCACATG
CCCCTGTTCT TTTTTATCGG AGGTTTTCTG TTTAAACCTG CTGCCGATCA GAAAGAATAC
CTGGCAAAGA AATCGTTTCA CCTCCTGGTG CCTTACGTTG CATTTCTTTT CCTGATCTAT
GTGCCATATG AACTGAAAGA GATCATGGCT GGTCGTGAAA CGTATGTGAA AGCAGTGATC
AGACCTGTGT TGGGCGGACG TTATCTGATT GAGTGGGTGT CGGTGTTCTG GTATATCACC
TGCTTCTTTC TGGTACAACA GGTGATGAAT GTGCTGATGA ACAAAGTGAG TAAAAAAGTC
ATTGATCTGT TGATGCTGGC AAGTTTGCTG GTTAGTTATG CACTGAGCAG ATTTCTACCT
TCTTTCTGGT TGCCATGGAA TGCAGATGTG GTGTTTGCAG CATTACCGAT TTTCTACCTG
GGTTACCTGT ACAAAGGCGC ACAGGAGCAG ATCAGCAGGT ATAAGATCGT ATTATTTCTG
TTGCTTGCCG GCGTGATTGT ATTCACTTAT TACTATCCGG CTAACAGGTA TGAAATGAAA
TCGGCTGTGT ATGGTATTCC TTTTGTTACG CTATTCTCCA GCCTGGTTAT TGTACTATGC
CTGATAGAGT TATCAAAACT GATTGCCAGC AACGCCACTA TCAGTAAAGT GTTTAATGAA
CTGGGTACTG CTTCAATGAT TGTGATGTTC CTGCATCAGC CTATACAGTT CATCGCAAGA
GAGCAGTTTG GTATAACAGA TCCTGCCACG CGTTTTTTTA TAGCAGTGGT ATTGTCGATG
GGAGGTTATT ATCTGCTGAA CAGTATGGCT TTTGGAAGAG CCGTTTTCAT GGGATCACTG
ACAGATTTCA AAAAGATATT CAGCAGGGAA AAGCTGGCAA CGGTATAA
 
Protein sequence
MSTQSRIAWI DTLKGIGILT VVAGHIFPDA VSRYIFLFHM PLFFFIGGFL FKPAADQKEY 
LAKKSFHLLV PYVAFLFLIY VPYELKEIMA GRETYVKAVI RPVLGGRYLI EWVSVFWYIT
CFFLVQQVMN VLMNKVSKKV IDLLMLASLL VSYALSRFLP SFWLPWNADV VFAALPIFYL
GYLYKGAQEQ ISRYKIVLFL LLAGVIVFTY YYPANRYEMK SAVYGIPFVT LFSSLVIVLC
LIELSKLIAS NATISKVFNE LGTASMIVMF LHQPIQFIAR EQFGITDPAT RFFIAVVLSM
GGYYLLNSMA FGRAVFMGSL TDFKKIFSRE KLATV