Gene Cpin_2367 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2367 
Symbol 
ID8358522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2910527 
End bp2911624 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content48% 
IMG OID644964553 
Productglycosyl transferase group 1 
Protein accessionYP_003122059 
Protein GI256421406 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.128404 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCAGG TTTCTGATAA ACAACGTATA CTGGTTTATT CTACCCAGTT AATGGAAACT 
GGTGGTATAG AAAGCCATCT GCTGGAATTC TGCCGGCAGA TGGCTGCTAA CGGTACGGAA
ATTGACCTGG TGGTGCTGAA TGCAGCGACT ACCGGCGAAA CAGAGCAGTT CTACAGAAGT
ATCTGTCGTA AGGTACACTT CGGAAGACAC GGCCGTTCCT ACAAACGTTT ACTGTGGATG
TTGCAGACAG GATTAAAACT GCGCAGCTCC CGTAAATACG ACGCCGTTTA TACCAATGGT
CAGGGAGAGA GTATCTGGAT GTTGTCCCGT ATGCTGCCGG GTTATGCCAC CTGGGTACAT
CATCACCATA CTTCCGGTGA TGCGAAAGAC CAGGCTACCT GGGGCGAGAA ATATAAAAAG
ACATTGCATA CTGCCAATAC CATTATTGCC TGTTCACACA GAAATGCAGG CGATATGCAA
AGCGTATTGC AACGTCAGGT GGACACGATT CCCTGTTTCT CCAGAAATGT GGAAGTCTCT
TTCACCGAAA ATAATTCAGG TAAACTGCGC TTCGGTTATT ATGGCCGTCT GATTGCAGAG
AAAGGCATCG ATCTGATCTG CAGAATGAGT GAAGACGCAG ATCTGAAAAA CGAAGTGGAA
TTTCATCTGT GGGGAGAAGG AAAGAATTAT CCGGCTCCTT ATTTCGATCA ATATCCCAAT
GTACATTATC ACGGTACCTT TGCAGGAGAA GCGGGTTTAA AGGGCGCTAT AGCGCAACTG
GACGCCTATC TGCTGCTATC TGTACATCCG GAGGGACTGC CTATCAGTCT GCTGGAAGCA
ATGAGTGCAG GATTACCCTG GCTGGCGACA GACAGAGGCG GTATTCCGGA CATTGCCTGT
GATCCTTTGT CCACACGAGT GATATCGGCA GCAGTGGATT ATGAAGCTGC AAAAAACGCT
GTACTGGCAT TTGCAAAAGA TATCAGGAGC GGACTGGTGA CAAAGACGAC GCAGAAGGAC
CTGTATGCAA AGAGATTTTC TGCCGTGGCA TTACGCACTG CCTGGAGTAA TGTACTTGGA
CTTCAAAAGC AAAACTAA
 
Protein sequence
MAQVSDKQRI LVYSTQLMET GGIESHLLEF CRQMAANGTE IDLVVLNAAT TGETEQFYRS 
ICRKVHFGRH GRSYKRLLWM LQTGLKLRSS RKYDAVYTNG QGESIWMLSR MLPGYATWVH
HHHTSGDAKD QATWGEKYKK TLHTANTIIA CSHRNAGDMQ SVLQRQVDTI PCFSRNVEVS
FTENNSGKLR FGYYGRLIAE KGIDLICRMS EDADLKNEVE FHLWGEGKNY PAPYFDQYPN
VHYHGTFAGE AGLKGAIAQL DAYLLLSVHP EGLPISLLEA MSAGLPWLAT DRGGIPDIAC
DPLSTRVISA AVDYEAAKNA VLAFAKDIRS GLVTKTTQKD LYAKRFSAVA LRTAWSNVLG
LQKQN