Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2367 |
Symbol | |
ID | 8358522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 2910527 |
End bp | 2911624 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644964553 |
Product | glycosyl transferase group 1 |
Protein accession | YP_003122059 |
Protein GI | 256421406 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.128404 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGCAGG TTTCTGATAA ACAACGTATA CTGGTTTATT CTACCCAGTT AATGGAAACT GGTGGTATAG AAAGCCATCT GCTGGAATTC TGCCGGCAGA TGGCTGCTAA CGGTACGGAA ATTGACCTGG TGGTGCTGAA TGCAGCGACT ACCGGCGAAA CAGAGCAGTT CTACAGAAGT ATCTGTCGTA AGGTACACTT CGGAAGACAC GGCCGTTCCT ACAAACGTTT ACTGTGGATG TTGCAGACAG GATTAAAACT GCGCAGCTCC CGTAAATACG ACGCCGTTTA TACCAATGGT CAGGGAGAGA GTATCTGGAT GTTGTCCCGT ATGCTGCCGG GTTATGCCAC CTGGGTACAT CATCACCATA CTTCCGGTGA TGCGAAAGAC CAGGCTACCT GGGGCGAGAA ATATAAAAAG ACATTGCATA CTGCCAATAC CATTATTGCC TGTTCACACA GAAATGCAGG CGATATGCAA AGCGTATTGC AACGTCAGGT GGACACGATT CCCTGTTTCT CCAGAAATGT GGAAGTCTCT TTCACCGAAA ATAATTCAGG TAAACTGCGC TTCGGTTATT ATGGCCGTCT GATTGCAGAG AAAGGCATCG ATCTGATCTG CAGAATGAGT GAAGACGCAG ATCTGAAAAA CGAAGTGGAA TTTCATCTGT GGGGAGAAGG AAAGAATTAT CCGGCTCCTT ATTTCGATCA ATATCCCAAT GTACATTATC ACGGTACCTT TGCAGGAGAA GCGGGTTTAA AGGGCGCTAT AGCGCAACTG GACGCCTATC TGCTGCTATC TGTACATCCG GAGGGACTGC CTATCAGTCT GCTGGAAGCA ATGAGTGCAG GATTACCCTG GCTGGCGACA GACAGAGGCG GTATTCCGGA CATTGCCTGT GATCCTTTGT CCACACGAGT GATATCGGCA GCAGTGGATT ATGAAGCTGC AAAAAACGCT GTACTGGCAT TTGCAAAAGA TATCAGGAGC GGACTGGTGA CAAAGACGAC GCAGAAGGAC CTGTATGCAA AGAGATTTTC TGCCGTGGCA TTACGCACTG CCTGGAGTAA TGTACTTGGA CTTCAAAAGC AAAACTAA
|
Protein sequence | MAQVSDKQRI LVYSTQLMET GGIESHLLEF CRQMAANGTE IDLVVLNAAT TGETEQFYRS ICRKVHFGRH GRSYKRLLWM LQTGLKLRSS RKYDAVYTNG QGESIWMLSR MLPGYATWVH HHHTSGDAKD QATWGEKYKK TLHTANTIIA CSHRNAGDMQ SVLQRQVDTI PCFSRNVEVS FTENNSGKLR FGYYGRLIAE KGIDLICRMS EDADLKNEVE FHLWGEGKNY PAPYFDQYPN VHYHGTFAGE AGLKGAIAQL DAYLLLSVHP EGLPISLLEA MSAGLPWLAT DRGGIPDIAC DPLSTRVISA AVDYEAAKNA VLAFAKDIRS GLVTKTTQKD LYAKRFSAVA LRTAWSNVLG LQKQN
|
| |