| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2360 |
|---|
| Symbol | |
|---|
| ID | 8358515 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 2903100 |
|---|
| End bp | 2903657 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644964546 |
|---|
| Product | NusG antitermination factor |
|---|
| Protein accession | YP_003122052 |
|---|
| Protein GI | 256421399 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0250] Transcription antiterminator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00889306 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACAGA AGACACACAC CTGGTATGCA GTCTATACTA AACCCAGATG GGAGAAAAAA
GTAGCCGATG CGCTTGTTCG TAAGCAAATC GAAACTTACT GTCCAATAAA CAGAGTAACA
CATCAGTGGA GCGACAGAAA AAAGATCGTT GAAGAACCTC TTTTCAAGTC GTATGTTTTT
GTCCGCATTC CTGAGGACAA GAAAACACTC GTCCGCGAAA CAAGCGGTAT CGTGAATTTC
GTTTACTGGT TAGGAAAACC TGCCAGCATT CCTGATCATG AAGTTGAACT CATTAAACGT
TTCCTGCGTG AATACCAGGA CGTACAGGTT GAGCGCTTCC CGATCCAGGA AGACGATCTG
ATCCGAATCA CTGCAGGTCC GCTGATGCAC CAGCACGGAA GGGTAGTGGA AGCCGGTAAG
AATACAGTGA AAGCTGTATT GTACAGTATG GGCTTCTCCC TGATCGCTAC TGTGAAAACA
AGTGATCTTA TGCTGGTTAA TAACAATGCT AAAGAATATT CCGGTGCGGC GAAAGCCAGC
GTCGGCAATG TTATCTAA
|
|---|
| Protein sequence | MEQKTHTWYA VYTKPRWEKK VADALVRKQI ETYCPINRVT HQWSDRKKIV EEPLFKSYVF
VRIPEDKKTL VRETSGIVNF VYWLGKPASI PDHEVELIKR FLREYQDVQV ERFPIQEDDL
IRITAGPLMH QHGRVVEAGK NTVKAVLYSM GFSLIATVKT SDLMLVNNNA KEYSGAAKAS
VGNVI
|
|---|
| |