Gene Cpin_2359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2359 
Symbol 
ID8358514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2900526 
End bp2902910 
Gene Length2385 bp 
Protein Length794 aa 
Translation table11 
GC content44% 
IMG OID644964545 
Productcapsular exopolysaccharide family 
Protein accessionYP_003122051 
Protein GI256421398 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0489] ATPases involved in chromosome partitioning 
TIGRFAM ID[TIGR01007] capsular exopolysaccharide family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.682984 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACAGA AAGTAATCAA TACGCGCACA AAGAGGGAGG AGCATACAGG TCTTCTGGAA 
ATGATCAGGC ATAAATACCA GCCTTACTGG CCACTATTTG TGATTGCGTC AATAATTTCT
CTCTCAATAG CATATGTTTA CCTGAGATAT GCAACCCCAT TATATAAGAT GACATCTTCT
TTGCTGATCA AAGAAGATAC GCGTCCTACC GAGAGCTCTA TCATTGAGAT GATGGACCCG
CTCGGCAGAG GCAAAAAAGT TGATAACGAA ATTGAAATAC TCAAGTCCAG AACAATTGCA
AAAACAGTTG TAAGGAATCT GAACCTTTAC GGAGAAGTCT TCGAAAAGGG CAGGATCAGG
GACATTTCCA TGTATAAAAA AGGTCCGCTG CAATTCAATT TTATTGATCC GGATCTGATC
AATCCCGACG AGAACAAAAT CGTTGAACTG CAATATGATT ATAAAGGACA GAAAGTTTCC
CTCGATGGAA AAAGTTATCC TTTAAATGAT ACTGTACATA CCGAATGGGG CCGTATGGTG
ATCAGAGCAG TGCCAGGTTA TAATCCTGCA GGCCAGCATG GCGAAGGATT TTATCTGCGT
GTAGCGGGAG ATAAAGTACT GGGCGGTGTA TTCCTCAGTA ACCTGAAGAT CGCTGCTGCT
ACTAAAAACT CCAATGTACT CAGACTGGAA TACGTTGATG CAGTGCCTCA GAGAGGTATG
GATATGCTCA ACGAAGTGAT GAAAGCTTAT GATAACGCGT CTATCGATGA TAAGAATAAA
ACGGCGTCAA AAACAATGGC GTTCGTGGAA GACAGGCTGC GTATCATCAC TGCCGAATTA
AGTCAGGTAG AAGGTCAGAT ACAGGAATAT AAAACAAATG AAGGTATCGT TGATATCGGT
GAACAGAGTA AGATTTTCCT GAATGCCGTA CAGGATAACG ACGTGAGACT TAGCGAAGCC
GATATGCAGT TATCCACACT TTCTGCGGTA GAACAATATG TAAGAGGTAA GAAAACAGAA
GATAACCTTG TCCCGGCTAC ACTGGGTATC GCAGACGCAA CCTTACTGGG ATTGCTGAGC
AAGTTACAGG ATGCAGAACT GCAATACGAA AGACTGAAAA AGACGACAGG TGAAAATAGT
CCCCTGCTGG CTAGTCTGAG TGCACAGATC GACAAACTGA GACCTGCCAT CATGGATAAT
ATCACCAGTT TACGCGCTAA CCTTGAAGCT TCAAGAGCTA AGCTGAGTAC ACAGAACAAC
CGCTTCATGA GTATGCTGAA AGGCGTACCG AGCAAAGAGA AAACTTTGCT GGAAGTAAGC
AGACAACAAG CGATTAAAAA CAATATCTAT ACATTCCTGC TGGAAAAACG TGAAGAGACA
CAGCTGCAAT ATGCTGCTGC TATTTCTGAC AGCCGTATCA TCGATCTGGC AGAAGCTGAG
TCTTATCCTT TCAGTCCGAA GAAATCAATG GTAATGGCAC TGGCATTGAT CGCCGGTATC
GCTGTTGTAG CTGGTTTCAT TGCTGTGAAA GATCTGATGA ACAACAAGGT GATGTTCCGT
TCAGATATTG AAAAAGGCAC TTCTGCACCA ATCATTGCAG AGATCATGTT CGACAAGAGT
GGCGCGATCG CTATCACAGA AGGCAAGCGT ACACCAGTGG CAGAACAGTT CAGGGCATTG
AGAACCAGTT TATCTTATAT TGGTATCAAC GGGGACAATA AAACGATCCT GGTGACCTCT
TCTATCTCCG GTGAAGGAAA GAGCTTTGTG GCAGTGAATC TGGCGCTGAG TCTTTCCCTG
ACGAAGAAGA AAGTCGTGTT ACTGGAGTTT GACCTTAGAA AGCCAAAAGT AAGTAAGATC
CTTAATGTGC CGCACCATCC GGGTATCAGT AATTACCTGG TAGGACATTC ATCACTGAAT
GATATCCTCA AGCAGCCAAT TGAGAATAAT GAATACATGT ACCTGCTTTC TGCAGGTGTC
ATTCCGCCGA ATCCGACAGA GCTGATCCTG AATGGCAGAC TGGAACATTT ACTGGCTACA
CTGAGAGCTA CCTTTGATTA TGTGATCATT GACTCCGCTC CGGTAGGTCC GGTAACGGAT
GCCCGTTTGC TGGCGCCGTT TGCAGATGCT ACACTCTATG TTGTGCGTCA TGAAAGAACA
CCGAAGTTTA ATCTCAAAAT GATAGAAGAT CTCTATGAAC AGGGAGATCT CGGCAAGTTG
AATATTGTAT TCAATGGCCT CAAGATGCGC GGAGTACCTG GTTATGCATA TGCTTATGGC
GGAGGCTATG GTTATGGTAA CGGACAGGGC TATGGCTACG GCTATACAGA TGATCACAAG
AACGGATCCG TGAAGAAAGG ACGGTTTACA AAGATTTTTA AGTAA
 
Protein sequence
MQQKVINTRT KREEHTGLLE MIRHKYQPYW PLFVIASIIS LSIAYVYLRY ATPLYKMTSS 
LLIKEDTRPT ESSIIEMMDP LGRGKKVDNE IEILKSRTIA KTVVRNLNLY GEVFEKGRIR
DISMYKKGPL QFNFIDPDLI NPDENKIVEL QYDYKGQKVS LDGKSYPLND TVHTEWGRMV
IRAVPGYNPA GQHGEGFYLR VAGDKVLGGV FLSNLKIAAA TKNSNVLRLE YVDAVPQRGM
DMLNEVMKAY DNASIDDKNK TASKTMAFVE DRLRIITAEL SQVEGQIQEY KTNEGIVDIG
EQSKIFLNAV QDNDVRLSEA DMQLSTLSAV EQYVRGKKTE DNLVPATLGI ADATLLGLLS
KLQDAELQYE RLKKTTGENS PLLASLSAQI DKLRPAIMDN ITSLRANLEA SRAKLSTQNN
RFMSMLKGVP SKEKTLLEVS RQQAIKNNIY TFLLEKREET QLQYAAAISD SRIIDLAEAE
SYPFSPKKSM VMALALIAGI AVVAGFIAVK DLMNNKVMFR SDIEKGTSAP IIAEIMFDKS
GAIAITEGKR TPVAEQFRAL RTSLSYIGIN GDNKTILVTS SISGEGKSFV AVNLALSLSL
TKKKVVLLEF DLRKPKVSKI LNVPHHPGIS NYLVGHSSLN DILKQPIENN EYMYLLSAGV
IPPNPTELIL NGRLEHLLAT LRATFDYVII DSAPVGPVTD ARLLAPFADA TLYVVRHERT
PKFNLKMIED LYEQGDLGKL NIVFNGLKMR GVPGYAYAYG GGYGYGNGQG YGYGYTDDHK
NGSVKKGRFT KIFK