Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2359 |
Symbol | |
ID | 8358514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 2900526 |
End bp | 2902910 |
Gene Length | 2385 bp |
Protein Length | 794 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644964545 |
Product | capsular exopolysaccharide family |
Protein accession | YP_003122051 |
Protein GI | 256421398 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0489] ATPases involved in chromosome partitioning |
TIGRFAM ID | [TIGR01007] capsular exopolysaccharide family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.682984 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAACAGA AAGTAATCAA TACGCGCACA AAGAGGGAGG AGCATACAGG TCTTCTGGAA ATGATCAGGC ATAAATACCA GCCTTACTGG CCACTATTTG TGATTGCGTC AATAATTTCT CTCTCAATAG CATATGTTTA CCTGAGATAT GCAACCCCAT TATATAAGAT GACATCTTCT TTGCTGATCA AAGAAGATAC GCGTCCTACC GAGAGCTCTA TCATTGAGAT GATGGACCCG CTCGGCAGAG GCAAAAAAGT TGATAACGAA ATTGAAATAC TCAAGTCCAG AACAATTGCA AAAACAGTTG TAAGGAATCT GAACCTTTAC GGAGAAGTCT TCGAAAAGGG CAGGATCAGG GACATTTCCA TGTATAAAAA AGGTCCGCTG CAATTCAATT TTATTGATCC GGATCTGATC AATCCCGACG AGAACAAAAT CGTTGAACTG CAATATGATT ATAAAGGACA GAAAGTTTCC CTCGATGGAA AAAGTTATCC TTTAAATGAT ACTGTACATA CCGAATGGGG CCGTATGGTG ATCAGAGCAG TGCCAGGTTA TAATCCTGCA GGCCAGCATG GCGAAGGATT TTATCTGCGT GTAGCGGGAG ATAAAGTACT GGGCGGTGTA TTCCTCAGTA ACCTGAAGAT CGCTGCTGCT ACTAAAAACT CCAATGTACT CAGACTGGAA TACGTTGATG CAGTGCCTCA GAGAGGTATG GATATGCTCA ACGAAGTGAT GAAAGCTTAT GATAACGCGT CTATCGATGA TAAGAATAAA ACGGCGTCAA AAACAATGGC GTTCGTGGAA GACAGGCTGC GTATCATCAC TGCCGAATTA AGTCAGGTAG AAGGTCAGAT ACAGGAATAT AAAACAAATG AAGGTATCGT TGATATCGGT GAACAGAGTA AGATTTTCCT GAATGCCGTA CAGGATAACG ACGTGAGACT TAGCGAAGCC GATATGCAGT TATCCACACT TTCTGCGGTA GAACAATATG TAAGAGGTAA GAAAACAGAA GATAACCTTG TCCCGGCTAC ACTGGGTATC GCAGACGCAA CCTTACTGGG ATTGCTGAGC AAGTTACAGG ATGCAGAACT GCAATACGAA AGACTGAAAA AGACGACAGG TGAAAATAGT CCCCTGCTGG CTAGTCTGAG TGCACAGATC GACAAACTGA GACCTGCCAT CATGGATAAT ATCACCAGTT TACGCGCTAA CCTTGAAGCT TCAAGAGCTA AGCTGAGTAC ACAGAACAAC CGCTTCATGA GTATGCTGAA AGGCGTACCG AGCAAAGAGA AAACTTTGCT GGAAGTAAGC AGACAACAAG CGATTAAAAA CAATATCTAT ACATTCCTGC TGGAAAAACG TGAAGAGACA CAGCTGCAAT ATGCTGCTGC TATTTCTGAC AGCCGTATCA TCGATCTGGC AGAAGCTGAG TCTTATCCTT TCAGTCCGAA GAAATCAATG GTAATGGCAC TGGCATTGAT CGCCGGTATC GCTGTTGTAG CTGGTTTCAT TGCTGTGAAA GATCTGATGA ACAACAAGGT GATGTTCCGT TCAGATATTG AAAAAGGCAC TTCTGCACCA ATCATTGCAG AGATCATGTT CGACAAGAGT GGCGCGATCG CTATCACAGA AGGCAAGCGT ACACCAGTGG CAGAACAGTT CAGGGCATTG AGAACCAGTT TATCTTATAT TGGTATCAAC GGGGACAATA AAACGATCCT GGTGACCTCT TCTATCTCCG GTGAAGGAAA GAGCTTTGTG GCAGTGAATC TGGCGCTGAG TCTTTCCCTG ACGAAGAAGA AAGTCGTGTT ACTGGAGTTT GACCTTAGAA AGCCAAAAGT AAGTAAGATC CTTAATGTGC CGCACCATCC GGGTATCAGT AATTACCTGG TAGGACATTC ATCACTGAAT GATATCCTCA AGCAGCCAAT TGAGAATAAT GAATACATGT ACCTGCTTTC TGCAGGTGTC ATTCCGCCGA ATCCGACAGA GCTGATCCTG AATGGCAGAC TGGAACATTT ACTGGCTACA CTGAGAGCTA CCTTTGATTA TGTGATCATT GACTCCGCTC CGGTAGGTCC GGTAACGGAT GCCCGTTTGC TGGCGCCGTT TGCAGATGCT ACACTCTATG TTGTGCGTCA TGAAAGAACA CCGAAGTTTA ATCTCAAAAT GATAGAAGAT CTCTATGAAC AGGGAGATCT CGGCAAGTTG AATATTGTAT TCAATGGCCT CAAGATGCGC GGAGTACCTG GTTATGCATA TGCTTATGGC GGAGGCTATG GTTATGGTAA CGGACAGGGC TATGGCTACG GCTATACAGA TGATCACAAG AACGGATCCG TGAAGAAAGG ACGGTTTACA AAGATTTTTA AGTAA
|
Protein sequence | MQQKVINTRT KREEHTGLLE MIRHKYQPYW PLFVIASIIS LSIAYVYLRY ATPLYKMTSS LLIKEDTRPT ESSIIEMMDP LGRGKKVDNE IEILKSRTIA KTVVRNLNLY GEVFEKGRIR DISMYKKGPL QFNFIDPDLI NPDENKIVEL QYDYKGQKVS LDGKSYPLND TVHTEWGRMV IRAVPGYNPA GQHGEGFYLR VAGDKVLGGV FLSNLKIAAA TKNSNVLRLE YVDAVPQRGM DMLNEVMKAY DNASIDDKNK TASKTMAFVE DRLRIITAEL SQVEGQIQEY KTNEGIVDIG EQSKIFLNAV QDNDVRLSEA DMQLSTLSAV EQYVRGKKTE DNLVPATLGI ADATLLGLLS KLQDAELQYE RLKKTTGENS PLLASLSAQI DKLRPAIMDN ITSLRANLEA SRAKLSTQNN RFMSMLKGVP SKEKTLLEVS RQQAIKNNIY TFLLEKREET QLQYAAAISD SRIIDLAEAE SYPFSPKKSM VMALALIAGI AVVAGFIAVK DLMNNKVMFR SDIEKGTSAP IIAEIMFDKS GAIAITEGKR TPVAEQFRAL RTSLSYIGIN GDNKTILVTS SISGEGKSFV AVNLALSLSL TKKKVVLLEF DLRKPKVSKI LNVPHHPGIS NYLVGHSSLN DILKQPIENN EYMYLLSAGV IPPNPTELIL NGRLEHLLAT LRATFDYVII DSAPVGPVTD ARLLAPFADA TLYVVRHERT PKFNLKMIED LYEQGDLGKL NIVFNGLKMR GVPGYAYAYG GGYGYGNGQG YGYGYTDDHK NGSVKKGRFT KIFK
|
| |