| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2320 |
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| Symbol | |
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| ID | 8358475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2854247 |
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| End bp | 2857090 |
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| Gene Length | 2844 bp |
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| Protein Length | 947 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644964506 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003122012 |
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| Protein GI | 256421359 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.500689 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAACCA GGAGTCTAAA TCGAATCGTG TTTTTATTGT TATGCCTTTA TGTACCATTT
GCTGCTGCAT ATGCACAGAA ACAAAGAATT ACCGGTAAAG TGACAGATGC TACCACAGGA
GTACCATTAG AAGGTATTAC TGTGCGCGTA AAACTGAGCG GTACCGGTAC GCTGACAGGT
AAAGAAGGTA CTTATGCCAT AGAGGCTAAA ACAGACGATG TGCTGGAACT CAGCGCCATT
GGTTTTAAGC CCTTATCCGT GCCTGTCAAT AGCCGTACGG TGGTGGACAT TCAGCTGACT
TCTACCGTAT CTGAACTATC GCAGGTCGTG CTGGTAGGTA CCCGTTCCGG CGGTCGTGCC
AGAATAGAAA CGCCCGTACC GGTAGATGTG ATCTCCATGA GCCAGACCGC CTATCCGACA
GCCAAAATGG ACCTGACAGC CCTGCTGAAC GTGTCTGCGC CTTCCTTTAA CTATAATAAA
CAGAGCGGAA GCGATGGTGC TGACCAGATC GACCTGGCTA CCTTACGTGG TCTCGGACCT
GATCAGACCC TTGTACTGGT CAACGGTAAA CGCCGGCATC AGACGGCCTT TATTGCCGTA
TATGGCACCC GTGGCCGTGG TAACTCAGGT ACTGACCTGA ATGCCATCCC GGAAGCCGCT
ATTGACCGTG TGGAAATACT GCGTGACGGT GCGTCCGCCC AATACGGTTC TGACGCGATT
GCGGGTGTCA TCAACATCAT CTTAAAGAAA GAAGTGAATC ACCTCTATGT AAATGCCGGA
TATGCCGGGT ATTACGATCA TAAATACAAT ACCCACTTCG GCCAGGATCT GAACCAGTAT
AAAAGCGGTG GCGCGATAGA TGGTAACGCC GTATCCGTAG GGCTCAGTTA TGGGGTGCCA
TTGGGCAAAA ACGGCGGTTT CCTGAACTTT TCAGGCAATT TCCTGAAACA GGGTAAGACC
TATCGTCAGG TGCTGGATAC CAACCTTGCC AACAAAGACG CCCTGCCGAT TAACGTTGTG
CGACGTTCCT ATGGCGATGC TTCCAAAACG ACCGGCGGTG GTATGCTGAA CCTGGAACTG
CCTTTTGCTG ACGGAAAGAC CACTTTCTAT GCGTTTGGAG GCTATAATTA CAAGTTCTCC
GACGCTTACG CTTATTCCCG TCACTTTAAC GGCAATAACC CCAGCTCCAG CGGGCACCCG
GACCGTTTCC CTACAGACGC TAACGGTAAC CTGATATTTT ATCCGGATAT TATGTACCCG
GTATCTTCTC CGGGAGGCGC TGCTAATGAC ACCGTATTTG ATCCGCATAT ACAGAACAAG
ATCAGGGACT GGTCGGCTGC TGCAGGTATC AAAGGTGAAT TTGGTAACGA CTGGACCTGG
GACCTGAGTA ATACCATTGG CCGCAACGAC TTCCATTTTT ATGGTGACAA AACGTTTAAT
GCTTCCATGG GAGCGAATAC GCCTACACAT TTTGACGACG GCGGATTTTC CTTCCTGCAG
AATACCGCTA ACCTGACCAT TGGTAAAGCG TTCAGCGGTG TGGCGCATGG ACTAAACCTC
GCATTAGGCG CAGAATACCG TTATGAGAAG TATCAGATCT ATGCCGGTGA TGCCGCCTCT
TACACCAATT ATGATCCTAC TTTCTTTAAG GCAACGGGTG CACAGGGTTT CCCTGGTTAT
CGTCCGAGTG ATGAAGTGGA TGCCAACCGA TCCAATATCG CCGGATTTGT AGATGCAGAA
CTGGATGTAA CAGACAAATG GCTGATCGGT GCAGCAGTGC GTGCAGAGAA CTACAGCGAT
TTTGGTTTCA CCAGTAACTA TAAATTCGCT ACCCGTTATA AAGTGACTTC CAACTTCAAC
CTGAGAGGTT CGGTAAGCAC AGGTTTCCGT GCCCCTTCTC TCCAACAGAT TAACTTCAGT
TCACAGTATA CTAACGTACA GGGGGGAACT ATTACAGAAG TAAAGATTGC TCCTAACAGT
AACAGTATTA CCAGGGCCGC CGGTATCCCT GATCTGAAAC AGGAAAAATC CGTCAATGCG
AGTCTGGGTT TCACCTGGAA ACCTCTAAGT GCATTATCTG TAACAGTTGA TGGTTACCTG
GTAAAAGTAA AAGACAGGAT CGTGTTATCC GGTCAGTTTA GTGCATCAGA TACCACACTT
TCTCCTGAGT TGTATCAGAC CTTGAATAAC CTGCATATCG ATAATGCACA GTTCTTCGCC
AATGCGGTGA ATACCACCAA TACGGGTGTT GATATCGTGA TTGATTATAA CAAACGTTGG
GCTAATCAGC GTTTCAGGGC TTTAATAGCG GCTAACTTCC AGCATATGAA GATCGATAAG
ATCAATGTGC CTGAGAAGCT GAATGATAGT TATCTGCACA GAAAATCATT CTTCAGCGAC
CGTGAAGAGC GTTTTGTACT GGCTTCAGCG CCTCCGGTGA AGATTGGTCT GAACCTGGAC
TATGGTATCA ATAAATTCGG CGTAAGCGCA CATGTCACTT ACTTTGGTAA AGTTGAATTG
TATGGCTATG GCTGGAGCGG GGATCTGGCA GGAAGCGGTA TCAATCCTGT TGTAGGACTG
GACAGCGATC CTGATAAACT GGTACCTGAA CTGTTTAAAT ATAAAGGCAA GGCAGTGACT
GACCTGGCGG TGAACTATAA GCTGACCAAA CAACTTAACT GGTTTGTAGG CGCTGATAAT
ATCTTCAATG TACATCCTTC ACTGGGAGTG GTAGATGGTG CGAGATTATC TGCTTATGAC
AGTGAAAGTG GCGGTGCCTG GGATGCGGTA CAGATGGGCT TTAATGGTAT TCGGCTGTTT
ACAAGATTTG TCCTGACACT ATAA
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| Protein sequence | MSTRSLNRIV FLLLCLYVPF AAAYAQKQRI TGKVTDATTG VPLEGITVRV KLSGTGTLTG
KEGTYAIEAK TDDVLELSAI GFKPLSVPVN SRTVVDIQLT STVSELSQVV LVGTRSGGRA
RIETPVPVDV ISMSQTAYPT AKMDLTALLN VSAPSFNYNK QSGSDGADQI DLATLRGLGP
DQTLVLVNGK RRHQTAFIAV YGTRGRGNSG TDLNAIPEAA IDRVEILRDG ASAQYGSDAI
AGVINIILKK EVNHLYVNAG YAGYYDHKYN THFGQDLNQY KSGGAIDGNA VSVGLSYGVP
LGKNGGFLNF SGNFLKQGKT YRQVLDTNLA NKDALPINVV RRSYGDASKT TGGGMLNLEL
PFADGKTTFY AFGGYNYKFS DAYAYSRHFN GNNPSSSGHP DRFPTDANGN LIFYPDIMYP
VSSPGGAAND TVFDPHIQNK IRDWSAAAGI KGEFGNDWTW DLSNTIGRND FHFYGDKTFN
ASMGANTPTH FDDGGFSFLQ NTANLTIGKA FSGVAHGLNL ALGAEYRYEK YQIYAGDAAS
YTNYDPTFFK ATGAQGFPGY RPSDEVDANR SNIAGFVDAE LDVTDKWLIG AAVRAENYSD
FGFTSNYKFA TRYKVTSNFN LRGSVSTGFR APSLQQINFS SQYTNVQGGT ITEVKIAPNS
NSITRAAGIP DLKQEKSVNA SLGFTWKPLS ALSVTVDGYL VKVKDRIVLS GQFSASDTTL
SPELYQTLNN LHIDNAQFFA NAVNTTNTGV DIVIDYNKRW ANQRFRALIA ANFQHMKIDK
INVPEKLNDS YLHRKSFFSD REERFVLASA PPVKIGLNLD YGINKFGVSA HVTYFGKVEL
YGYGWSGDLA GSGINPVVGL DSDPDKLVPE LFKYKGKAVT DLAVNYKLTK QLNWFVGADN
IFNVHPSLGV VDGARLSAYD SESGGAWDAV QMGFNGIRLF TRFVLTL
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