Gene Cpin_2314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2314 
Symbol 
ID8358469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2848374 
End bp2848907 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content43% 
IMG OID644964500 
ProductYceI family protein 
Protein accessionYP_003122006 
Protein GI256421353 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.133318 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAG TACTCTATCC ATTAGCATTT GCGCTTGTAC TATTCGCTTC TGCCTTCACA 
TTCGTTTCCT CCCAGAACTG GAAGATCGCA GAAGGATATT CTATTAAATT TTCCGGTTCA
GGCGCCAACG GCATATTCAA AGATCTGAAA GGACAGGTTG TATTCGATGA GAAAAATCCG
GCTGCTTCCA AATTCGATGT GACAATTGCT GTAAGTTCCA TCAACACCGG TAACGGCTTA
AAAAACACAC ATGCAAAAGG TGGCAAATGG TTTGATGCCT CCAAGTTTCC TACCATCCAC
TTTGTATCTT CTAAAGTCAC CAAAACTGCA ACAGGTTATG ATGCACAGGG TGAACTGGAA
ATGCACGGTG TGAAAAAACC TTTTACAATT CCTTTTACAT TTGCAAAGAA TGGTAATGGC
GGTACCTTCA CGGGCAACTT CGATGTGAAC CGTGTAGATT TTGGTATCGG TGAAGCAGGC
GGCAGAGTGG ATGATGTATT CAAACTGCAG GTAAGCGTAC CTGTTACACA ATAA
 
Protein sequence
MKRVLYPLAF ALVLFASAFT FVSSQNWKIA EGYSIKFSGS GANGIFKDLK GQVVFDEKNP 
AASKFDVTIA VSSINTGNGL KNTHAKGGKW FDASKFPTIH FVSSKVTKTA TGYDAQGELE
MHGVKKPFTI PFTFAKNGNG GTFTGNFDVN RVDFGIGEAG GRVDDVFKLQ VSVPVTQ