Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2306 |
Symbol | |
ID | 8358461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 2841933 |
End bp | 2842364 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644964492 |
Product | GPW/gp25 family protein |
Protein accession | YP_003121998 |
Protein GI | 256421345 |
COG category | [R] General function prediction only |
COG ID | [COG3628] Phage baseplate assembly protein W |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.545012 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAG AGTATTATAA ACTGCCGCTT GACTTTTCCC GGATCCTGCA AAAAAAGGAC CTTCCTGACT GCAACCTGGA AGACTCCGTA GCCCAACATA TACAACTGCT CATTACAACC GTACTTGGGG AAAACAAAGA CGATCCCCAG TACGGTTGCC GGATATGGGA TTTCGACTTT GACATCCGGG CTTCCAACAA CGAAGTTAAG GAACAGGTGG AACTCTCCGT AAAAAGTGCC ATCGTGCGTT ATGAACAACG TATCACGCAG GTAAGGGTTT CTGCCATGGT CAGCCAGGAA GAACTGAACG GCATCAGCGC CAAAAAAGTC AAGAAAAAGA TACGGGTGAC TATCACCGGT ACCCTGGCCC GCAATAAAAC TCCATTCCAT TACAGCAGCT TCTTTTATGT AAGTCCGCTG TCGTACGATT AA
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Protein sequence | MKKEYYKLPL DFSRILQKKD LPDCNLEDSV AQHIQLLITT VLGENKDDPQ YGCRIWDFDF DIRASNNEVK EQVELSVKSA IVRYEQRITQ VRVSAMVSQE ELNGISAKKV KKKIRVTITG TLARNKTPFH YSSFFYVSPL SYD
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