Gene Cpin_2306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2306 
Symbol 
ID8358461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2841933 
End bp2842364 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content47% 
IMG OID644964492 
ProductGPW/gp25 family protein 
Protein accessionYP_003121998 
Protein GI256421345 
COG category[R] General function prediction only 
COG ID[COG3628] Phage baseplate assembly protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.545012 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAG AGTATTATAA ACTGCCGCTT GACTTTTCCC GGATCCTGCA AAAAAAGGAC 
CTTCCTGACT GCAACCTGGA AGACTCCGTA GCCCAACATA TACAACTGCT CATTACAACC
GTACTTGGGG AAAACAAAGA CGATCCCCAG TACGGTTGCC GGATATGGGA TTTCGACTTT
GACATCCGGG CTTCCAACAA CGAAGTTAAG GAACAGGTGG AACTCTCCGT AAAAAGTGCC
ATCGTGCGTT ATGAACAACG TATCACGCAG GTAAGGGTTT CTGCCATGGT CAGCCAGGAA
GAACTGAACG GCATCAGCGC CAAAAAAGTC AAGAAAAAGA TACGGGTGAC TATCACCGGT
ACCCTGGCCC GCAATAAAAC TCCATTCCAT TACAGCAGCT TCTTTTATGT AAGTCCGCTG
TCGTACGATT AA
 
Protein sequence
MKKEYYKLPL DFSRILQKKD LPDCNLEDSV AQHIQLLITT VLGENKDDPQ YGCRIWDFDF 
DIRASNNEVK EQVELSVKSA IVRYEQRITQ VRVSAMVSQE ELNGISAKKV KKKIRVTITG
TLARNKTPFH YSSFFYVSPL SYD