Gene Cpin_2289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2289 
Symbol 
ID8358444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2821822 
End bp2822718 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content41% 
IMG OID644964475 
Producthypothetical protein 
Protein accessionYP_003121981 
Protein GI256421328 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAAT TGGTTAATGT CCTGCACCAT TTTTTGTATA CCACCAGGAA AGCCCAGCAA 
ACAGATCTTT TATTGTTAGG TACCCTGTTA GCCCGTCAGA ACAAGGATCT GCCTGTGCTG
GACAACATTG CAGCCGCCGA ATTCAAAGTG TTTTCGCAAA CGGGAGACGA TGGTATTATT
CAATACCTCA TTAATAAAGT ACATATACCT GAAACAACTT TTGTTGAATT CGGTGTGGAA
AACTATGTTG AATCCAATAC GCGTTTTCTG TTGAAGTATA ATAACTGGTC GGGGATGGTG
ATTGATGGTT CTGAAAAGAG TATACGTTAT ATACAGTCTG ACGATATTTA TTATCAGCAC
GACCTGAAAG CAGTCAAGGC ATTTATTACC ACAGATAATA TTAATGAATT GATCGGTTCG
CAGGGATTGA AAGGAGAGAT AGGATTATTA TCGGTAGATA TTGATGGTAA TGATTATTGG
GTGTGGAAGG CGATTAATAT AGTTGACCCC GTTATCGTAG TAGCAGAATA TAATAGTGTG
TTTGGTATTG AGAAAGCCAT TACCGTGCCC TACAAGCCGG ACTTTGTCAG AGAGCGTGCG
CACTACAGTC ACCTGTATTT TGGCGCGTCG CTGAAAGCGC TGTGTATGCT GGCCGAAGAA
AAAGGATATG CGTTTGTCGG ATCCAATTCT ATAGGTAATA ATGCTTATTT TGTGAAAAAA
CATCGTCTGG GATTGCTGAA AGCACTTACA CCTGAAGAAG GTTATGTATA TTCCCGTTTC
CGTGAAAGCC GTGATAAAAA GGGGTACCTC AACTACCTGT CTGGCCACGA GAGATATGAA
TGTATTAAAG GTATGCCCGT GCATAACGTT GCAACAGGGG TACAGGAACA ACTATAA
 
Protein sequence
MTKLVNVLHH FLYTTRKAQQ TDLLLLGTLL ARQNKDLPVL DNIAAAEFKV FSQTGDDGII 
QYLINKVHIP ETTFVEFGVE NYVESNTRFL LKYNNWSGMV IDGSEKSIRY IQSDDIYYQH
DLKAVKAFIT TDNINELIGS QGLKGEIGLL SVDIDGNDYW VWKAINIVDP VIVVAEYNSV
FGIEKAITVP YKPDFVRERA HYSHLYFGAS LKALCMLAEE KGYAFVGSNS IGNNAYFVKK
HRLGLLKALT PEEGYVYSRF RESRDKKGYL NYLSGHERYE CIKGMPVHNV ATGVQEQL