Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2283 |
Symbol | |
ID | 8358438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 2814401 |
End bp | 2815042 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644964469 |
Product | hypothetical protein |
Protein accession | YP_003121975 |
Protein GI | 256421322 |
COG category | [S] Function unknown |
COG ID | [COG4627] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0240086 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAGT TATATGTCCA ATATGGTTGT GGACCTTTTT CAGCACCCAA AGGCTGGAAA AACTTTGATG CATCGCCGAC ACTGCGTATA CAACAGTTGC CCCTGATCGG TGGATTGCTG AAGAACAGAA TGCATGTAAC CTTTCCTGAA GATGTTTTGC TGGGCGATAT TCTCAGAGAA TTGCCGGGTA TAGATCCCGA CTCCTGCGAC GGCGTATACT GCTCTCATGT ACTGGAACAC CTGGCATATG ATGATTGTGT ACTGGCCGTA CAAAACACTT ATAAAATGAT GCGCCCGGGT GGTTACTTCC GCTGTGTCGT ACCAGACCTG GAAAGCGCTG CACGGGAATA TGTACAGGAC CTTTCAAATC ATGACAGAGA GGCGAATACC AAATTCCTGG AAAAGACCAT GCTGGGCAAA AAGCAAAGAC TACGTGGCTT TAAAGGACTC ATTCAAACCA CACTTGGCAA CAGGGAACAC CTGTATATGT GGGATACTCC TTCACTCACC AATATATTAC AACAGGCAGG ATTTAAACAG GTAAGGACCT GCCAGTTCAA TGATTGTCCG GACGATATGT TCAGACTTGT AGAAGAAGCA TCCAGATTCG AGAGCGCAGT TGCATTAGAG GCTATAAAAT AA
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Protein sequence | MSKLYVQYGC GPFSAPKGWK NFDASPTLRI QQLPLIGGLL KNRMHVTFPE DVLLGDILRE LPGIDPDSCD GVYCSHVLEH LAYDDCVLAV QNTYKMMRPG GYFRCVVPDL ESAAREYVQD LSNHDREANT KFLEKTMLGK KQRLRGFKGL IQTTLGNREH LYMWDTPSLT NILQQAGFKQ VRTCQFNDCP DDMFRLVEEA SRFESAVALE AIK
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