Gene Cpin_2245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2245 
Symbol 
ID8358398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2762385 
End bp2763533 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content45% 
IMG OID644964429 
Producthistidine kinase 
Protein accessionYP_003121937 
Protein GI256421284 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAAAC AGGTTATAGG CTGGAAGTTT GTACTGGTAT CCACAGCGGT GATCATCATT 
GTGGGTACAA TCTGGTACGT AAGCAGCATC GCCAGCAAAC TGGAAGAAGA AGAAACCAAG
AAAGTAGCCA CCTGGGTGGC TGCCAACCGG GAATTGCTCC AGGCTTCCGA TGAAGCGAAC
CTGAACCTGG CCGTAGAGAT TATCACAAAT AATACCAGCA TTCCCGTTAT TATCACCAAC
GAGAATGGTC ACATCATCGA CTCCCGTAAT CTTGATACGA CCAAACTGGC AGGCAATCCC
AAATACATGG AAAATCAGCT GACCACTTTC AAAAATCAGC ACCCGCCATT TATTATGGAG
ATCGACGCCA AAAACAATCT CTATAATTAC ATCTATTACG GCGACTCCCT GATCCTGAAA
CAGGTACGTT ATTACCCATA TATTCAGCTG ATTGTAGTCG CCCTGTTTAT CAGTATCGTA
CTCGTCGCAT TGTCCACTTC CAACCGTGCT ACCCAGAACC TTTTATGGGT GGGTATGGCC
AAGGAAACGG CCCACCAGCT GGGTACTCCC CTGTCTTCCA TAGAGGCATG GATAGAGATC
CTGAAAGACA ATGAAGGCAA CGAACTGGTA GCGACGGAAT TGCGTAAAGA CGTCGACAGA
CTGAAACTCA TTACAGAACG TTTCTCCAAA ATAGGTAGTG TGCCGCAACT GGAAGAACGT
GATGTAGTCA GTCAGGTGGA ATCGATGGTT ACCTACATCC GGAAAAGAGC GCCGCAGAAA
GTCATTCTGA CCATGCATTG CCAGGAACAT GAAATTCCTG CGATGATATC GCCTTCATTA
TTTGACTGGG TCATTGAAAA TCTGCTGAAA AACGCGCTGG ATGCCATGGA AGGAAAAGGC
ACTATCGATC TTTATATAGA AAATCATCCC ACAAACATCG TCATTGACAT CACCGATAAT
GGTAAAGGCA TCCCAAAAGC TAATTTCGAA AAAGTCTTCA AACCCGGCTT TAGCACCAAA
AAACGGGGTT GGGGGCTGGG ATTATCCCTT GCAAAAAGAA TTATTGAAGA ATACCATAAA
GGGCGGCTAA CTGTACGCTG GTCGGAGCTT AACAAGGGAA CGACCTTCAG AATTCTGCTA
AGAAAATGA
 
Protein sequence
MFKQVIGWKF VLVSTAVIII VGTIWYVSSI ASKLEEEETK KVATWVAANR ELLQASDEAN 
LNLAVEIITN NTSIPVIITN ENGHIIDSRN LDTTKLAGNP KYMENQLTTF KNQHPPFIME
IDAKNNLYNY IYYGDSLILK QVRYYPYIQL IVVALFISIV LVALSTSNRA TQNLLWVGMA
KETAHQLGTP LSSIEAWIEI LKDNEGNELV ATELRKDVDR LKLITERFSK IGSVPQLEER
DVVSQVESMV TYIRKRAPQK VILTMHCQEH EIPAMISPSL FDWVIENLLK NALDAMEGKG
TIDLYIENHP TNIVIDITDN GKGIPKANFE KVFKPGFSTK KRGWGLGLSL AKRIIEEYHK
GRLTVRWSEL NKGTTFRILL RK