Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2243 |
Symbol | |
ID | 8358395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 2760327 |
End bp | 2761172 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644964426 |
Product | ABC transporter related |
Protein accession | YP_003121935 |
Protein GI | 256421282 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGATT TCGCTTTACA GAAGACTTTA CATACCGTAG AAGGGGAGAT GCCGTTCAAT GTCAGTGCGC GCATTGAAAG AGGGCAATTT GTAGGCTTGT ATGGGGTATC AGGTGCAGGA AAGACTTCCG TATTGCGTAT GCTGGCGGGG TTTATGAAAC CGGATGATGG CCACATAAAG GTGGGGAGTG AATTTTGGTT TTATGGTGAA GAAGCGTTTC ATATGCCCAC ACAACACCGG AGTATCGGGT TTGTATTCCA GGATTATGCG CTGTTTCCCA ATATGAATGT GGAAGAGAAT ATCACTTTTG CTTTACGCAA AAACGAGTCT CGCACGATCG TGGATGAATT GCTGGAATTG ACAGGTTTGA AGAACCTTGC CAAGAGAAAG ATACAGACAC TTTCCGGCGG ACAACAACAG CGGGTAGCAT TAGCCAGAGC GATTGCCAAA AGACCAGCTT TATTGCTGTT GGATGAACCT CTATCTGCAT TGGACAGTGG TATGCGTGCA CAGTTGCAGG AGACTTTACT GGATGTGCAT AAACGCTATG GACTAACGAC TATCCTGGTG AGTCATAATG CGGAGGAAAT GGTGAAGTTA GCTGATACGG TGATTCACCT GGAGAATGGT AAGTTTCAGC GCCAGGTATC TCCTTCGGCA TTCTTCCTGA ACGGGGAAGA TAGCTCCGGG CTGAAGGGAA AGGTAGTAGC CATAGCACCC GATGGAGAGG TTACCGTACA GGTGGAAAGC GGTGTATTGC GACTAAAATC CCCCAGACAG GACTTACATG TAAACGATCA GGTGGATATC TCCTGTAATG TAGATATGTA TCATTTGAAG AAATGA
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Protein sequence | MIDFALQKTL HTVEGEMPFN VSARIERGQF VGLYGVSGAG KTSVLRMLAG FMKPDDGHIK VGSEFWFYGE EAFHMPTQHR SIGFVFQDYA LFPNMNVEEN ITFALRKNES RTIVDELLEL TGLKNLAKRK IQTLSGGQQQ RVALARAIAK RPALLLLDEP LSALDSGMRA QLQETLLDVH KRYGLTTILV SHNAEEMVKL ADTVIHLENG KFQRQVSPSA FFLNGEDSSG LKGKVVAIAP DGEVTVQVES GVLRLKSPRQ DLHVNDQVDI SCNVDMYHLK K
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