Gene Cpin_2243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2243 
Symbol 
ID8358395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2760327 
End bp2761172 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content46% 
IMG OID644964426 
ProductABC transporter related 
Protein accessionYP_003121935 
Protein GI256421282 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGATT TCGCTTTACA GAAGACTTTA CATACCGTAG AAGGGGAGAT GCCGTTCAAT 
GTCAGTGCGC GCATTGAAAG AGGGCAATTT GTAGGCTTGT ATGGGGTATC AGGTGCAGGA
AAGACTTCCG TATTGCGTAT GCTGGCGGGG TTTATGAAAC CGGATGATGG CCACATAAAG
GTGGGGAGTG AATTTTGGTT TTATGGTGAA GAAGCGTTTC ATATGCCCAC ACAACACCGG
AGTATCGGGT TTGTATTCCA GGATTATGCG CTGTTTCCCA ATATGAATGT GGAAGAGAAT
ATCACTTTTG CTTTACGCAA AAACGAGTCT CGCACGATCG TGGATGAATT GCTGGAATTG
ACAGGTTTGA AGAACCTTGC CAAGAGAAAG ATACAGACAC TTTCCGGCGG ACAACAACAG
CGGGTAGCAT TAGCCAGAGC GATTGCCAAA AGACCAGCTT TATTGCTGTT GGATGAACCT
CTATCTGCAT TGGACAGTGG TATGCGTGCA CAGTTGCAGG AGACTTTACT GGATGTGCAT
AAACGCTATG GACTAACGAC TATCCTGGTG AGTCATAATG CGGAGGAAAT GGTGAAGTTA
GCTGATACGG TGATTCACCT GGAGAATGGT AAGTTTCAGC GCCAGGTATC TCCTTCGGCA
TTCTTCCTGA ACGGGGAAGA TAGCTCCGGG CTGAAGGGAA AGGTAGTAGC CATAGCACCC
GATGGAGAGG TTACCGTACA GGTGGAAAGC GGTGTATTGC GACTAAAATC CCCCAGACAG
GACTTACATG TAAACGATCA GGTGGATATC TCCTGTAATG TAGATATGTA TCATTTGAAG
AAATGA
 
Protein sequence
MIDFALQKTL HTVEGEMPFN VSARIERGQF VGLYGVSGAG KTSVLRMLAG FMKPDDGHIK 
VGSEFWFYGE EAFHMPTQHR SIGFVFQDYA LFPNMNVEEN ITFALRKNES RTIVDELLEL
TGLKNLAKRK IQTLSGGQQQ RVALARAIAK RPALLLLDEP LSALDSGMRA QLQETLLDVH
KRYGLTTILV SHNAEEMVKL ADTVIHLENG KFQRQVSPSA FFLNGEDSSG LKGKVVAIAP
DGEVTVQVES GVLRLKSPRQ DLHVNDQVDI SCNVDMYHLK K