| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2228 |
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| Symbol | |
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| ID | 8358380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 2746236 |
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| End bp | 2747099 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644964411 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003121920 |
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| Protein GI | 256421267 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.498591 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.437814 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACT ATTCCTTGCT GCTATTTTTT GCGATATTTC TGCTCGCTTT GCAATCGAAT
GCACAGACCG GATTACCCAA GGTTGGTATT TGTACTTCCC GTGCAAATGA CAGTTTGTTA
CATGCTTCCG GCTACGCCTA TATAGAGGAA GGCGTACAGA AGCTGCTTTC TCCCGCCATC
TCGGATGACA CCTTTAATGT ACAACTGGCT CAACTGAGGA AGATGCAGTG CCAGGTAAAG
ACCTGTAATA GCTTCTTTCC GGCGGAGATC CGTCTGACCG GCGCTGACGT GGATGAGAAA
AAGGTACTGG ACTATGTAGA AGTCGTGATG GCAAGGGCCA AACGGGCTGG TATTGAACTG
ATCGTACTGG GAAGCGGCAA CGCGCGCAAA CTGCCGGATG GCTATAATAA AGATTCCGCC
ACAATGCAGT TCGTCGATCT TTGCCGCAAA ATGGCAGTCG TGGCAGGGAA ATATGGCTTG
GTGATCGCTA TAGAGAACCT GAACACCACT GAGACGAATT TCGTTACCAC ACTGGAAGAG
GCCAATGCAG TCGTAATGGC AGTAGGCCAT CCTAATTTCA AACTGACTGC CGACATCTAT
CATATGCTTA AAGAGCATGA ATCGCCTGAA ATGCTGAAGA AGGCTCGTAA AAACCTGGTG
CATTGCCACA TTGCCGAAAG GGAAAAACGT ACTGCTCCCG GCTCTACAGG TGATGATGTA
GCGCCTTATA TCGCAGCACT GGGCAATATC GGCTATACCG GCCGGATCTC CCTGGAATGC
CGCTGGGATG ATATGGCTGC GCAGACTCGT CCTACGCTGG AATACATGCA GCAGCAGATC
CGCAACGCTT ACAAAAAACA ATAA
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| Protein sequence | MKNYSLLLFF AIFLLALQSN AQTGLPKVGI CTSRANDSLL HASGYAYIEE GVQKLLSPAI
SDDTFNVQLA QLRKMQCQVK TCNSFFPAEI RLTGADVDEK KVLDYVEVVM ARAKRAGIEL
IVLGSGNARK LPDGYNKDSA TMQFVDLCRK MAVVAGKYGL VIAIENLNTT ETNFVTTLEE
ANAVVMAVGH PNFKLTADIY HMLKEHESPE MLKKARKNLV HCHIAEREKR TAPGSTGDDV
APYIAALGNI GYTGRISLEC RWDDMAAQTR PTLEYMQQQI RNAYKKQ
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