| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2109 |
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| Symbol | |
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| ID | 8358261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2583128 |
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| End bp | 2586592 |
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| Gene Length | 3465 bp |
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| Protein Length | 1154 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644964294 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003121803 |
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| Protein GI | 256421150 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.607649 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTTTGA AAATTGTCAC CTTTCTGATG CTTGTTACCT TGATGCATGT GAGTGCAAGC
AGCTTTAGTC AGGCAATCAG TCTGAATGAA AAGGATACAC CTGTTGAAAA AGTGCTGGAA
CGGATCAGTA AGCAGTCTGG TTTCCACTTC TTTTATGATG CTGCCACCTT TGCTAATTAC
AAGGTGACGA TCAGTATCAG AGATGCCCAG ATTGAAAAAG CACTGGATAG CTGTCTGCGT
GGATTACCAG TGACCTATAA GATCATGGGT AAAAACGTAG TGCTGGTATC CGCAGAAAAA
AATAACAGCA TCCCGTCTCA GCCACAACAA GCACGGATTG TAAAAGGAAC CGTGTTTGAT
GAAGACATGA AGTTGCTTAT TGGTGTAACC ATCCGTAACC GCAATAGCGG TAAAGGCACC
GTTACCGACA GCAAAGGCGG ATATGTGATA GCCGCTGATA TCGGCGATGT GCTGGTAATC
AGTTTTGTGG GTTATGTCAC CCGTGAGGTA ACAGTAGGGA ATCAGCCGAC TATCGACTTT
CAGCTGAAGG TGACAAATGC TGCACTGAAC CAGGTCGTTG TAGTAGGATA CGGTAGTACC
AGGAAGAAAG ACCTCATTGG ATCCGTAGCT ACGGTGAACG TAAATGAAAT ACGGAATGTT
CCCTTTGCCA CTATCGATAT TGGTCTGGCA GGTAAAGCCG CTGGTGTACA GGTGGTACAG
TCTGACGGCT CTCCCGGTGG TGTGGCTAAT ATCCGTGTAC GTGGCGGTAC GTCTATCCTT
GGGGGGAATG ATCCTTTATA CATCATCGAT GGTGTGCAGA TTACGCCCAC CAGCCGCTAT
ATCAAAACGC CTGGCGAAGT GGTAGACCCT GTTGCACGTT CGACCAACTT CAGTGATCCA
TCCAATGCTA TTTCGGGTGC TTATGCACGT GGATTGAATA GTCTGGCGGG ATTGAACATT
AATGATATTG AATCTATTGA TATCCTGAAA GACGCATCTG CCACCGCCAT CTATGGATCT
AAGGCGGCAA ATGGCGTCGT GATCATCACC ACCAAACAAG GTACACAGGA TACGAAGCCT
TATTTTGAAC TAAATAATTA TACCGGTGTT TCCCGTCCGG TTAAAGCCGA TGTGCTGAAT
GCAGATCAAT ACAGGATGAT CCTGAAAGAA GCCGCTACGA ACTATAACGC CGACAGGGTG
GCCATGGGGG AGCAACCTTC AGCTACGGCG AATAAGATCC TTAATGATCC TTCCTATCTG
GGTATGGATA ATACAGACTG GTTATCGCTT GTATTGAGGA GCGGTCTTAC CCAGAACACA
GACGTTTCTG TACGCGGTGG TGGCAGAGGA ACCCGTTATT ACACGTCCCT TTCTTATTCA
GAACAGAAAG GCGTGGTAAA AGGTACTGAC TTCAAACGCC TGTCGGGTAA GCTGAACCTT
GATAACCAGG TCAATGCCCG GCTGAAGTTT ACAACAAATA TCAACTACGC ATTTTCTACC
AACAATATCA CCAACGGCGC ATATGCCCAG GCATTATATG CACCGCCTAC CCGGGCGCCT
TATAATCCTG ATGGTACATT GGCTAATCTG GCCGGCAGTG CCGTGAATTC AGATAATTTC
AACGGGTTTC AGAATCCGCT GGCATTGCTG AATGGTATCA ACCAGGGTAA AAATGGATTG
TTTCTTGGCT CACTGGCACT TGAGTATAAT ATTGTCAATG GGCTGAAATT CCGTAGCCAG
GCTTCCATCA ATTACAACCA GTATCACCAG CGTAACTACA CACCTTCTTC TGCCCAGGTA
CAAACTGCCA GTGGCGCAGG AAGTTCTATG GGAGGTATTG GTTCACAGGG ACAAACAGAA
ACGACCAGCT ACCTGTATGA AAATACATTG AGCTATAATA AACAGTTCGG ACCGGATCAT
CGTCTGGATG TAGTAGCGGG TACTTCCTGG CAGGAAGACA GGTCTAATTC ATTCCAGGCT
TCCGGACAAA CCTATCCGGA TGATTTTATC CTGAATAATT TATCATCAGC TGCTGTGACA
CTGCCAAGTA AGTCGGCCGC CTTCCAAAAT GCTTTACTAA GCTTTTACCT GCGTGCTAAC
TATGCTTTCA GGGATAAATA CCTGATCACT TTTACCGGTC GCTCGGATGC TTCTTCGAAG
TTCTCTTCAG ATAACAGGGT GGGTTATTTC CCTTCCGGTG GTATCGGCTG GCGTATTTCG
CAAGAAAAAT TCATGAAAAA GTTTACCTGG ATCGATGATA TGAAACTGCG TGCCAGTGCT
GGTTATACAG GTACGCAGAA TATCGGTAAC TACCTGTACC GTACGCTGTA TACGCCTGTA
TCCTACAATG GTACAAATGC TGTGATCCCA TCTCAACTGG GTAACAACAA AGTGAAATGG
GAACAGACCT TACAGAAAGA TGCGGGTATT GATATCTCTA TGTTCAGATC CCGTCTGGTA
CTGAATGTGG GGGTGTATGA GAAGAAGTCT TCCGGCTTGT TATTTAATCA ACCTTTGCCA
TCCAGTTCTT CCTACTCATC TGTCATCGCC AACCTGGCAG ACATCCGCAA CAGAGGACTT
GAAATTGAGG TTTCCGGCAA TGTTATTACA GGTAAACATG CGGGCTGGAG AAGCAGTCTG
AATATGTCTT TCAACCGTAG TCTCGTGACC GGTCTGAATA TGGATTATAC GGATCCGAAT
CATGGTGGTG GGGTTACTTC TTCCGGCGGA CAGAGTTATA TCATGTCCAA TACGGTACTG
AGAACCGGAT ATCCGGTAGG ACAGTTTGTG GGTACACCCT ACAATGGTAT CATTCAGAAT
AAAGAACAGC TGGACGCGTA TAAAGCGGCC TTTCCTTACT ATGCCTTCTT TACTCCTTAT
CTGAATATAG GAGATCCGAT GTATGTGCTG GCGACCAGTG GTCCGCTGTC GGGATTTCCT
GATTCTTATG CACTCATAGG AAGCGCTGCA CCGAAGTTCT ATGGTGGATG GACGAATACC
GTTAACTGGC GCAATTTCAC CCTGTCAGCT TTAATGACCT ATTCCTATGG CGGACATATC
CTCTATGCGG CGGATATTGC CAATAAATCA GTGACTGATC TTACCAATAA GGGAGTGCGC
ATACTGGACC GCTGGACGCC TGAAAACAAA GATTCAGATC GTCCGAGACT TATTTACGGA
CAGAACTCCA ATTTCACCAG CAGTAATGAT ATTTATAGTT CCTCCTTTAT CAAGCTGAAA
TCTATAACGC TCAATTACCA GTTTCCGCAA ACACTGTTGA CGCGGACGAA GGTACAGTCA
GCCTCCATCT ATGCTTCTGC TACCAATCTG TTTACGATCA CGAACTATCC GGGACAGGAT
CCGGAGGTGA GCAATGATCC ATATAGCATT GTAGATGGTT ATACGGATTC CAACAATTAT
CCGACTATCC GTCAGTTTGT ATTGGGTTTC AGATTCGGCT TCTAG
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| Protein sequence | MVLKIVTFLM LVTLMHVSAS SFSQAISLNE KDTPVEKVLE RISKQSGFHF FYDAATFANY
KVTISIRDAQ IEKALDSCLR GLPVTYKIMG KNVVLVSAEK NNSIPSQPQQ ARIVKGTVFD
EDMKLLIGVT IRNRNSGKGT VTDSKGGYVI AADIGDVLVI SFVGYVTREV TVGNQPTIDF
QLKVTNAALN QVVVVGYGST RKKDLIGSVA TVNVNEIRNV PFATIDIGLA GKAAGVQVVQ
SDGSPGGVAN IRVRGGTSIL GGNDPLYIID GVQITPTSRY IKTPGEVVDP VARSTNFSDP
SNAISGAYAR GLNSLAGLNI NDIESIDILK DASATAIYGS KAANGVVIIT TKQGTQDTKP
YFELNNYTGV SRPVKADVLN ADQYRMILKE AATNYNADRV AMGEQPSATA NKILNDPSYL
GMDNTDWLSL VLRSGLTQNT DVSVRGGGRG TRYYTSLSYS EQKGVVKGTD FKRLSGKLNL
DNQVNARLKF TTNINYAFST NNITNGAYAQ ALYAPPTRAP YNPDGTLANL AGSAVNSDNF
NGFQNPLALL NGINQGKNGL FLGSLALEYN IVNGLKFRSQ ASINYNQYHQ RNYTPSSAQV
QTASGAGSSM GGIGSQGQTE TTSYLYENTL SYNKQFGPDH RLDVVAGTSW QEDRSNSFQA
SGQTYPDDFI LNNLSSAAVT LPSKSAAFQN ALLSFYLRAN YAFRDKYLIT FTGRSDASSK
FSSDNRVGYF PSGGIGWRIS QEKFMKKFTW IDDMKLRASA GYTGTQNIGN YLYRTLYTPV
SYNGTNAVIP SQLGNNKVKW EQTLQKDAGI DISMFRSRLV LNVGVYEKKS SGLLFNQPLP
SSSSYSSVIA NLADIRNRGL EIEVSGNVIT GKHAGWRSSL NMSFNRSLVT GLNMDYTDPN
HGGGVTSSGG QSYIMSNTVL RTGYPVGQFV GTPYNGIIQN KEQLDAYKAA FPYYAFFTPY
LNIGDPMYVL ATSGPLSGFP DSYALIGSAA PKFYGGWTNT VNWRNFTLSA LMTYSYGGHI
LYAADIANKS VTDLTNKGVR ILDRWTPENK DSDRPRLIYG QNSNFTSSND IYSSSFIKLK
SITLNYQFPQ TLLTRTKVQS ASIYASATNL FTITNYPGQD PEVSNDPYSI VDGYTDSNNY
PTIRQFVLGF RFGF
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