| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2090 |
|---|
| Symbol | |
|---|
| ID | 8358242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 2557678 |
|---|
| End bp | 2561349 |
|---|
| Gene Length | 3672 bp |
|---|
| Protein Length | 1223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644964275 |
|---|
| Product | phosphoribosylformylglycinamidine synthase |
|---|
| Protein accession | YP_003121784 |
|---|
| Protein GI | 256421131 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0046] Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain
[COG0047] Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01735] phosphoribosylformylglycinamidine synthase, single chain form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCATT TCTTTGTGAA CCAAACAGAC TTTGTCTATT GTGTTCAAAC AGAAAACGAC
CTTTCTCAAG AAGACATTCA GAAGCTTAAC TGGCTCTTCG GCAACGCCAA AAAATTAGAC
GAACTTACTG TGAACCGTAC CTATGTGGGC CCTCGCGCTG CGATGATCAC CCCGTGGAGT
ACGAATGCAG TGGAGATTAC CCAGAACATG GGGATCACCG GCATCATCCG TATCGAGGAA
TTCGAACCGG TTCCTGCCGA CTTCAACGAG TTCGATCCGA TGATTTCACA AAAGTACCAG
GCTTTAACAC AGGAACTTTA CACGATTAAT ATTCAGCCGG AACCTATTCT GGAGATCGAC
AACATCGATG TTTATAACAA ACAGGAAGGT CTGTCACTGA ATCCGGAAGA AGTAGAATAC
CTGAATAAGC TGTCTGTGAA GATCGGCCGT AAGCTGACAG ACTCAGAAGT ATTTGCGTTT
TCCCAGGCGA ACTCAGAACA CTGCCGTCAC AAGATCTTCA ACGGAACTTT CGTGATTGAC
GGTGAAGAAA TGCCGACTTC CCTCTTCAAA CTGATTAAGA AGACTTCCGA AACGAATCCT
AATGATATCG TTTCTGCTTA TAAAGATAAC GTGGCTTTTA TAAAAGGCCC GAAAGTAACA
CAGTTCGCTC CTAAGTCAGC CGATAAACCT GACTACTATG AAGAGAAAGA ATTTGACTCC
GTTTTATCAC TGAAAGCAGA AACACACAAC TTCCCGACGA CAGTTGAACC ATTTGCCGGC
GCCGCTACTG GTTCCGGTGG TGAGATCCGC GACCGTCTGG CAGGTGGCCA GGGCTCTTTG
CCACTGGCAG GTACCGCTAT TTATATGACC GCTTACTCCC GCCTGCTGGA AGACAGACCA
TGGGAAAAAG GGATGCAGGA GCGTAAATGG TTATATCAGA CACCAGTAGA TATCCTGATC
AAAGCATCCA ATGGTGCTTC TGATTTCGGT AATAAATTCG GTCAGCCACT GATCACCGGT
TCCGTACTGA CCTTCGAACA CGAAGAAGAA GGACGCAAAC TGGGTTATGA TAAAGTGATT
ATGCAGGCCG GTGGTATCGG TTATGGTAAA CTGAATCAGG CGAAAAAACA CACACCAAAA
GAAGGCGATA AAATCGTTAT CCTCGGTGGT GAAAACTATA GAATCGGTAT GGGTGGCGCA
GCAGTTTCCT CTGCTGACAC CGGTGCATTC GGTTCCGGTA TCGAACTGAA TGCCATTCAG
CGTTCCAATC CTGAAATGCA GAAACGTGCT GCCAACACCA TCCGTGGTCT GGTAGAATCT
GATAACAATA CCATCGTTTC CATTCACGAC CACGGTGCAG GCGGACACCT TAACTGTCTG
TCTGAACTGG TAGAAGAAAC AGGTGGTCTG ATCGATCTGG ATAAATTACC AGTTGGCGAT
CCTACCCTCT CCGCAAAAGA AATCATTGGT AACGAGTCCC AGGAAAGAAT GGGGCTGGTG
ATCGGCGAAA AAGATATAGA AAACCTGCAG AAGATCGCTG ACCGCGAACG TACCCCCATG
TACACCGTCG GTGATGTAAC CGGTGACCAC CGTTTTACCT TCGCCTCTGC ACACACAGGC
GTAAAACCAA TGGATTTTGC CCTGGAAGAT TTCTTCGGTT CTTCTCCGAA AACCATCATG
AAAGACCGCA AAATACAGCG TAACTATGCT GCTCTTTCTT ATGATGTGAA AAATATACCC
GCTTACCTGA ACCAGGTATT GCAACTGGAA GCTGTTGCCG CTAAAGACTG GCTGACCAAC
AAAGTAGACC GTTGTGTAGG TGGCCGTGTT GCGAAACAAC AGTGTGCCGG ACCATTACAA
CTGCCGCTGA ACAACGTTGG TGTAATGGCG CTGGATTACA AATCAACAGA AGGTATTGCT
ACCACAGTTG GTCACTCTCC GCTGACTGCA CTGGTTGATC CGGCTGCAGG TTCCCGTAAC
GCCATCGCAG AAGCTTTATC CAATATCGTT TTTGCTCCTG TCAAAAATGG CCTGAAAGGT
ATTTCCCTTT CTGCCAACTG GATGTGGGCG TGTAACAATG AAGGAGAAGA TGCACGTCTT
TATGAAGCGG TAAAAGCCTG CTCCGATTTT GCTATCGCAC TGGGCATCAA CATTCCAACC
GGTAAGGACT CCTTGTCCAT GAAGCAGAAA TATCCGAATG GCGATGTTAT TGCTCCAGGT
ACAGTAATCA TCTCCGCCGC AGGCAACTGT ACAAACATCA ATAAAGTAGT AGAACCTGTA
CTGCAGAAAA ATGCAGGTTC CGTTTACTAT ATCAACTTAT CAAAAGATGC ATTCAAATTA
GGTGGTTCTT CCTTCGCACA GATCAATAAC AAGATCGGTC CGGATGTTCC GACTATTCAG
GATGCAGACT ACTTTGCAAA AGCATTCAAC ACCATCCAGG ACCTGATCAA CAACGATCAG
ATAGCGGCTG GTCACGATAT CGGCTCCGGT GGTTTGATCA CTACCCTGCT GGAATTATGC
TTTGCTGACG TTAACCTGGC TGCCGATTAC GACTTAAGCG GATTAAACGA AGCCGACACC
GTAAAAGCAC TCTTCAACGA AAACATAGCA GTCGTATTAC AGGCTACCAA CGATGCAGCA
TTTGAACAGG CATTGAAAAA TGCAGGTATC GATGCGGTAA AAATCGGTAC CGTTAAAGAA
GCGAAGGAAG TAAGTGTCAA AAACAACGCT GATACCTTCA CATTCAATAT CGCTGACACC
CGTGATACAT GGTTCAAAAC CTCCTTCCTG CTGGATCAGA AACAGTCCAG AAACGGCATG
GCACAGGAGC GTTTCAACAA CTATAAATTA CAGCCATTAA CCTACGCCTT CCCGGCACAG
TTTGATGGTA AAAAACCTGC GATCGACGCA TCTAAACCTC GCCCTAAGGC AGCTATTATC
CGCGAAAAAG GTTCCAACTC TGAGCGTGAA ATGGCCAATG CAATGCGCCT GGCAGGATTT
GATGTAAAAG ATGTACATAT GACTGACCTG ATCTCTGGTC GTGAAACACT GGAAGATATT
CAGTTCATTG GCGCTGTAGG TGGTTTCTCC AACTCCGATG TATTAGGTTC CGCTAAAGGC
TGGGCCGGCG CATTCATGTA CAATGAGAAA GCTAAAAAAG CACTGGATAA CTTCTTTGCT
CGTCCTGATA CAATGTCCGT AGGTATCTGT AACGGCTGTC AGCTGTTTAT GGAACTGGAA
CTGATCAATC CGGATCACGC TGTACACGGT AAGATGCTTC ATAACACTTC CGGCAAACAC
GAATCCAACT TCGTATCTGT AAAAATACAG GAGAACGATT CCATCATGAT GAAAACCTTA
GCTGGTGCTA CATTAGGTGT ATGGATCTCT CACGGAGAAG GTAAATTCAA ATTACCAAAT
ACCGAAGATC AGTATAAGAT CACCGCTAAA TATGCATATG ATGCATATCC GCACAATCCT
AACGGATCTG ACTTCAATAC CGCAATGATG TGCGACAATA CCGGCCGTCA CCTGGTAACA
ATGCCACACA TCGAGCGTTC TATCTTCCAA TGGAACTGGG CGAACTATCC AAAAGGTCGT
CAGGATGAAG TGACGCCATG GTTAGAAGCT TTTGTGAACG CGAAGAAATG GTGCGAAGAG
AATAAGAAAT AA
|
|---|
| Protein sequence | MIHFFVNQTD FVYCVQTEND LSQEDIQKLN WLFGNAKKLD ELTVNRTYVG PRAAMITPWS
TNAVEITQNM GITGIIRIEE FEPVPADFNE FDPMISQKYQ ALTQELYTIN IQPEPILEID
NIDVYNKQEG LSLNPEEVEY LNKLSVKIGR KLTDSEVFAF SQANSEHCRH KIFNGTFVID
GEEMPTSLFK LIKKTSETNP NDIVSAYKDN VAFIKGPKVT QFAPKSADKP DYYEEKEFDS
VLSLKAETHN FPTTVEPFAG AATGSGGEIR DRLAGGQGSL PLAGTAIYMT AYSRLLEDRP
WEKGMQERKW LYQTPVDILI KASNGASDFG NKFGQPLITG SVLTFEHEEE GRKLGYDKVI
MQAGGIGYGK LNQAKKHTPK EGDKIVILGG ENYRIGMGGA AVSSADTGAF GSGIELNAIQ
RSNPEMQKRA ANTIRGLVES DNNTIVSIHD HGAGGHLNCL SELVEETGGL IDLDKLPVGD
PTLSAKEIIG NESQERMGLV IGEKDIENLQ KIADRERTPM YTVGDVTGDH RFTFASAHTG
VKPMDFALED FFGSSPKTIM KDRKIQRNYA ALSYDVKNIP AYLNQVLQLE AVAAKDWLTN
KVDRCVGGRV AKQQCAGPLQ LPLNNVGVMA LDYKSTEGIA TTVGHSPLTA LVDPAAGSRN
AIAEALSNIV FAPVKNGLKG ISLSANWMWA CNNEGEDARL YEAVKACSDF AIALGINIPT
GKDSLSMKQK YPNGDVIAPG TVIISAAGNC TNINKVVEPV LQKNAGSVYY INLSKDAFKL
GGSSFAQINN KIGPDVPTIQ DADYFAKAFN TIQDLINNDQ IAAGHDIGSG GLITTLLELC
FADVNLAADY DLSGLNEADT VKALFNENIA VVLQATNDAA FEQALKNAGI DAVKIGTVKE
AKEVSVKNNA DTFTFNIADT RDTWFKTSFL LDQKQSRNGM AQERFNNYKL QPLTYAFPAQ
FDGKKPAIDA SKPRPKAAII REKGSNSERE MANAMRLAGF DVKDVHMTDL ISGRETLEDI
QFIGAVGGFS NSDVLGSAKG WAGAFMYNEK AKKALDNFFA RPDTMSVGIC NGCQLFMELE
LINPDHAVHG KMLHNTSGKH ESNFVSVKIQ ENDSIMMKTL AGATLGVWIS HGEGKFKLPN
TEDQYKITAK YAYDAYPHNP NGSDFNTAMM CDNTGRHLVT MPHIERSIFQ WNWANYPKGR
QDEVTPWLEA FVNAKKWCEE NKK
|
|---|
| |