| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2080 |
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| Symbol | |
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| ID | 8358232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2543046 |
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| End bp | 2546522 |
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| Gene Length | 3477 bp |
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| Protein Length | 1158 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644964265 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003121774 |
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| Protein GI | 256421121 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.301107 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAAC ATCGTTTTGC GTTCCGCATG TTCCGTAGTG GTCCGTTTCT AAAATTTTCT
CCGGCCAGAC GGATGACGGC ATTGTTCTTT ACTTTTTTAT TATTGCAGAT AAACGTCCAG
ACGCAGGCAC AAACCGTTAC ACTCAAGGGA AAAGATCTCA CTTTGAAACA GGTATTCAAA
GCTATTGAGC AACAAACCGG TTATGTTGTT TTTGCCAACA AAAGTTATCT GAATGAGACA
AAAAGCGTCG CTGTAGAAGC GAATGCAATG CCATTGAGAC AATTTATGGA GGCATGTACA
AAAGATCAGC CGTTTGGTTT TACAATTGCT GATAATACCA TTACGCTGAC GCCGAAGGCC
AAGTCTAAGT CGGGTGATAA TGTCGTTCCT GTAAAAGAGA TGGTAGAGGG AAAAGTATCC
GGCGTCGACG GACAAGTACT GGAAGGTGCT TCCATCAGGG TGAAAGGTAA CACCAATGGC
ACCTATACCG ATAAAGAAGG CAGATTCTCC ATAGACGCTT ATGAGGGTGA TGTTCTTATT
ATTTCATTCG TCGGATTTGA ATCCAGGGAA TACAAAATTG GGAGTAACCA CCATTTTAAT
ATTGTCCTGA ACAGGGCGAG CATCACTGCA GGGGAAATCG TTATCTCCAC CGGTTACCAG
CAGAAAAAAG TCAGTGAAAT TACCGGCGCT TTACAGACAA TTAAAGGCGA TGAGCTGCGT
AAAGGCGTCT CCACTGTCAA TGCTTTGGCT ATGCTGAAAG GAAAGGCCAG CGGACTTTAC
ATCGTTGAAA ACGGCGGTAG TGTGGCGACA AGAGGACAGG TGGTGATGCA TGGTCAGGCA
TCAATGCCAG ACCAGTCTAA TACTAATTTC GGTCCCTTAC TGGTGATAGA TGGTGTTATC
AGCAATGTTC CAAACCTCCA GGATATCGTC AATCCGAATG ATATCGAAAG TATTACTATT
CTTAAAGACG CAGCTTCTAC CGCGATCTAT GGATCGCGTG CAGCACAGGG TGTCATTGTG
GTGGTTACCC GCCGTGGTGC TAACGGTAAG ATGAAAATAG GACTGAATAC CAGTTATGGA
AAGGTGAAAA ACAACAGACT AGTAGATTAT ATGAATACCA GTCAGCTGAG TACTCATATA
CATAATTATA TGGCGTCATT GTACGCGGCA TCTCCGTCTT TAAATAGCAC CTATGGCAGT
TTTGATAACT ACTTTAATAC GACCAGGATC TATACAGACG ATGATCTGCA GCATGATTAT
GACTGGAGTA ATAAAACATT TTATCCGGAT GGTAACCAGA GTAACATCAA TCTTTCTATG
TCTGGAGGGA ATGAAAAGAC GAAAGTATAT ACTGCGCTTG ACTGGACCCG GCAGGATGGA
ACAATACTGG GAGATAACCT TGACAGGAAA GCATTCCGCC TGAACCTCGA TCAGCGGATT
AATAGCAAAC TTACGCTTAG CATCAATACC AATGTATTGA TCGATAAGTA TGCTGCTTCC
ACATCTGAAA ATCAGAATTA CCTTTTCCTC CCATGGGTCA CTCCTTATTA TGCAAATGGC
GCCCTGGCAG ATTCTGTACC TAATTATATA TATAATTCTT CAGGGAAAAG AGGTACGGTC
TACTATGATA ATCCTTTATA CTCTTATACA TATAATACTG CCATTACCAA AAGACAAAGT
TACCTGCTTA CGGGTAAGTT AAGGTATGAC ATCCTGCCAT GGTTGTCCGT ACAAACAACC
AATACACTGC AATACATCAA TAACAATCTT AATTCCTATA AAGATCCGCG GACTTACCGG
GGCCGTTATG ATGGCCCTGC AAACAACAGA ATATATGTAA ATGGTGCGTT GACCGTTTCT
GATGACAGAA CTAATTATTT CCTGACATCG AATCTGATTA CGGCCAGTAA ACAGTTTGGA
GAACATACCC TGACTGCTTT GGCCGGCCAG GAGTACAGTA AAACCAATAC AAGTTATTTC
TCCGTATCGG TATATGGGTC ACCTTATCCC GGAGAACGTA CATTAGGTGC TTTTCAGAAT
TATGGGACTT ATATTAACAA GCTATTCGGC ACAATAGCCA CTCCTTATTC TTCAGCTCCT
GTTGAAAAAG GCTCCTTCTC TGTATTTGGA GAGCTGAATG ATAATTACAA AGAGAAATAC
TTTGCATCTG CCTCATTGAG AAGAGATGCT TCTACCAATT TCGGTCGTAA CAACCGATAT
GGTACTTTTT ATTCTTTGAG TGCGGGATGG CTGATCAGTA AGGAATCATT TATGCAATCG
GTAAAACCAG TTACCAATCT GAAGTTGAGA GCCGCCTACG GTACCTCCGG CAGGGAAGCA
GGCGCTGATT ATCTCAATTT TACTACCTAT GCGGATGTGT TCCGTTATAA TGATGCAAAT
ACCTATGGCT CTACTATCCA GCGGTTGGGA AATGATCAGA TTACCTGGGA GACGACTTAT
ACTACCAATA TAGGATTGGA TCTTGAACTT TGGAAGCGTA TTAACCTGAG CACTGATCTG
TATAGCCGTC GTAGTGCCGG TCTGTTGCAA TCCGTGCAGT TACCTACCTA TATTGGTTTT
GCAACACAGA TCCGGAATAT CGGTGAGCTT ACCAATAAGG GGATAGATAT TAACCTGTCG
ACCATCAACG TGCAGACAAA GGACTTTAAG TGGACGACTG AATTTAACAT CAGCTTTAAC
AAAAACAGGC TGACCAAAAT ATATGGCGAT TCGTTGATTG ATGGTTTTAC AGGTGGCTAT
TATCGATATA AAGGCGAGGA CATTAATACA TTGAAGGCGA TCCCTTACCT GGGTGTGAAT
CCTGATAACG GAAGACCATT GTTCCAGCGG ATGAATGCCG ACAAAAGCAT ATCAATAGTA
GACTCTCTGC CATTGGCCAA AGCCGCGGGA TTACAGAATT ACCTTAATAT GGGATCTGCA
ACACCGAAAT TTTTCGGCGG CTTTACCAAT ACGTTTACGT ACAGGAACAT TACATTGAGT
GCCCTGTTTA ACTTCTCTTA TGGCAATAAG ATTGTCAATA ACAACATGCG GAACTTTATG
GACCCTACCG GCTGGCAGAA TGGTTTTAAT ATAGCCGCGC CTACAAAGGA GCAACACTTC
TGGAAAGCTC CGGGAGACAA GGCTGCCAAC TATCCCAACT TCTATGATCC TGCTTTCAGT
CAGCGGGGTG CGACCAACTT AGGATCATCA TTGCTTTACC AGAACGCCAG TTATTTAAGA
TTGAGGAATA TCCGTTTGTC ATATGATTTC CTGCCACGTA CGCTGCAGAG GATCAGTATG
TCTTCTCTTT CTGTATACGT AAGTGCTGAT AATGTATTTG TGATCAAAAA TAAGGCGCTC
TACGCTTCTG ATCCGGAAGG GGCTACCATT GGTGGAACAT CGAATAGTTA TGCCGGTACG
GGTATCAATG GTGCAATGCC CAGGAGGTTT GTCATTGGGC TGAATGCGGG TTTCTGA
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| Protein sequence | MQKHRFAFRM FRSGPFLKFS PARRMTALFF TFLLLQINVQ TQAQTVTLKG KDLTLKQVFK
AIEQQTGYVV FANKSYLNET KSVAVEANAM PLRQFMEACT KDQPFGFTIA DNTITLTPKA
KSKSGDNVVP VKEMVEGKVS GVDGQVLEGA SIRVKGNTNG TYTDKEGRFS IDAYEGDVLI
ISFVGFESRE YKIGSNHHFN IVLNRASITA GEIVISTGYQ QKKVSEITGA LQTIKGDELR
KGVSTVNALA MLKGKASGLY IVENGGSVAT RGQVVMHGQA SMPDQSNTNF GPLLVIDGVI
SNVPNLQDIV NPNDIESITI LKDAASTAIY GSRAAQGVIV VVTRRGANGK MKIGLNTSYG
KVKNNRLVDY MNTSQLSTHI HNYMASLYAA SPSLNSTYGS FDNYFNTTRI YTDDDLQHDY
DWSNKTFYPD GNQSNINLSM SGGNEKTKVY TALDWTRQDG TILGDNLDRK AFRLNLDQRI
NSKLTLSINT NVLIDKYAAS TSENQNYLFL PWVTPYYANG ALADSVPNYI YNSSGKRGTV
YYDNPLYSYT YNTAITKRQS YLLTGKLRYD ILPWLSVQTT NTLQYINNNL NSYKDPRTYR
GRYDGPANNR IYVNGALTVS DDRTNYFLTS NLITASKQFG EHTLTALAGQ EYSKTNTSYF
SVSVYGSPYP GERTLGAFQN YGTYINKLFG TIATPYSSAP VEKGSFSVFG ELNDNYKEKY
FASASLRRDA STNFGRNNRY GTFYSLSAGW LISKESFMQS VKPVTNLKLR AAYGTSGREA
GADYLNFTTY ADVFRYNDAN TYGSTIQRLG NDQITWETTY TTNIGLDLEL WKRINLSTDL
YSRRSAGLLQ SVQLPTYIGF ATQIRNIGEL TNKGIDINLS TINVQTKDFK WTTEFNISFN
KNRLTKIYGD SLIDGFTGGY YRYKGEDINT LKAIPYLGVN PDNGRPLFQR MNADKSISIV
DSLPLAKAAG LQNYLNMGSA TPKFFGGFTN TFTYRNITLS ALFNFSYGNK IVNNNMRNFM
DPTGWQNGFN IAAPTKEQHF WKAPGDKAAN YPNFYDPAFS QRGATNLGSS LLYQNASYLR
LRNIRLSYDF LPRTLQRISM SSLSVYVSAD NVFVIKNKAL YASDPEGATI GGTSNSYAGT
GINGAMPRRF VIGLNAGF
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