| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2070 |
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| Symbol | |
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| ID | 8358222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2520747 |
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| End bp | 2522873 |
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| Gene Length | 2127 bp |
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| Protein Length | 708 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644964255 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_003121764 |
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| Protein GI | 256421111 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1201] Lhr-like helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCCT ATGAAATGTT GAGTGAGCCC ATTCGCCGGT ATGTAAGAGA TAAAAAATGG
GAAACACTGC GTCCGATACA GGAGGCTGCT ATCACGAGGA TACTCAGTAC GGACAATCAT
TATATACTTG TATCAGCTAC GGCATCCGGC AAAACGGAGG CTGCTTTTCT GCCTGTGTTG
TCCGCGGTGG ACTTTAAGCA GCCAGGCATT CAGGTATTGT ATATTTCACC GTTGGTAGCA
CTTATCAATG ACCAGTTTGA ACGGGCGGAA CTGTTATGTA AATACCTGGA TATACCAGTG
ACAAGATGGC ACGGAGAAAG TAATCGTTCC GATAAGATGA AGCGTATAGA AGAGGCGCAT
GGTATTCTAC TCATCACACC AGAATCAATA GAAGGTTTAT TTTCAAACCG GCCAGAACGG
GGACGGGTAC TCTTCTCTAA TTTGCAGTTT ATCATCGTTG ACGAGGTTCA TAGTTTTCTG
AATACAGATC GTGGATTGCA TCTGCGTTCG TTATTATCGC GTATACATGC GCTGGCAAAG
ACGAAGCCGG CAAGAATGAT CGGACTTTCT GCCACTATCG GAGATTATGA AGCTGCTAAG
CAATTCACCG GAGAGCCTGA CAGGACAAAG GTACTGGTGG ATAGTACGCC TAAACAGATG
CAAGCGGAGT TTGTGTACTG GCCGGTAAGC GCCTATAAGG GGTTTAGCGA CGCTTTTATC
AATGATCTGT ATGAGGATAC TAAGAACAGC AAGGTTTTGC TGTTTCCCAA CAGTAGGAAA
AACGTGGAAG AACTGGCCTC AAAACTGCGC GGAAAAGCAG AACAACATCA GGGGCATACC
GCGTGGTTTT CACATCATGC ATCTTTAACC AAAGAGCAAC GGCATTATGC AGAGGAATTT
GCGAAAAACA GTACGCGGCA GCCTTACTGT ATCATTTGTA CTTCTACATT GGAACTTGGT
ATTGATATAG GTTCTGTAGA TCTGGTGGTA CAGGTAGATG CCTCGCCTTC TGTTGCATCG
CTTATTCAGC GCACAGGGCG TAGCGGGAGG CAGGAAGGTG CTATGAGCCG CCTGTTGATG
TATGCCACCA GACCATGGTC CCTGCTGCAA TCTATTGCCT GTTGGGAATT GTACCAATCA
GGTTATGTAG AGCCGTTGAA AGACAGGACC AAACCTTTCG ATATTCTTTT TCATCAGATT
TTATCGATTG CCAGAGAGTG CTATGGTATA ACCCGCAAAG CATTGGTAGA GCGGATCATG
GGGAATGCTG TTTTTAAGGA GCTAAGTAAA GAAGAAATCA CGGGTCTGAT CACACACATG
GTAAAGGAGT CATTCCTGGA AGACCTGAAG CGAGAACTGA TTGTTGGGTA CAAGGGAGAA
GCAATCACGA ATTCCCGGGA CTTTTATGCG ATGTTCAGTT CACCCGAAAA GATAAAGGTT
GTACATGCAG GTATAACTAT TGGTTCCATT GATGAAGAAG ATGCGTATGC GCTTTTTCCT
GGCACCTGTA TATTGCTGGC CACAAAAAGC TGGATGATCA CTGATATAGA CCGGCTGGCC
GGTAAGATAA CGGTGGTGGC GACGAACAAG TCCGGAAAAA CATTTTTTTC CAGTGAGGGG
ATGGCTGTGC ATCCTAAGAT AGAGGAGAAG ATGCTGGAGC TGCTTTGTAC AGATACGCTG
AAGGCCGAAT TGCAACCTGA TGCGCTGGCT TGCCTGCATA CACTCAGGGA GCAATTTTCA
CGTGTGGTGC TGCATAATTT TGAGTCTGAA CGCCCTGTAT TTATTCATCA GGGATTCATC
ACCTGGTTTC CATTTGCAGG TGACAGAATA CACAGTACAC TGGCTTATCT GCTGAAGGAG
GTCGATATGC ACCCGGATAC GCCTGGTATG GAGCTGACCC TGGAAATTGG ATTTTCAAAT
TTGCTGCCAT TACTTAAAAA GGAGATATTA CTATTACCAC AGCGTATAAG TGATATCATG
GATCATAGTC CCGATACTTT TTATACCGGC AAGTGGGGAA GGTATCTGCC ACTCAGCTTA
AAGAAGCAGT ATGTAATGGA GGAGGAGTTT GATATAAAAG GTACTGCGGC GTTTATTGAG
AGATTGAAGC TGGTGAAGAT CGTTTAA
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| Protein sequence | MTAYEMLSEP IRRYVRDKKW ETLRPIQEAA ITRILSTDNH YILVSATASG KTEAAFLPVL
SAVDFKQPGI QVLYISPLVA LINDQFERAE LLCKYLDIPV TRWHGESNRS DKMKRIEEAH
GILLITPESI EGLFSNRPER GRVLFSNLQF IIVDEVHSFL NTDRGLHLRS LLSRIHALAK
TKPARMIGLS ATIGDYEAAK QFTGEPDRTK VLVDSTPKQM QAEFVYWPVS AYKGFSDAFI
NDLYEDTKNS KVLLFPNSRK NVEELASKLR GKAEQHQGHT AWFSHHASLT KEQRHYAEEF
AKNSTRQPYC IICTSTLELG IDIGSVDLVV QVDASPSVAS LIQRTGRSGR QEGAMSRLLM
YATRPWSLLQ SIACWELYQS GYVEPLKDRT KPFDILFHQI LSIARECYGI TRKALVERIM
GNAVFKELSK EEITGLITHM VKESFLEDLK RELIVGYKGE AITNSRDFYA MFSSPEKIKV
VHAGITIGSI DEEDAYALFP GTCILLATKS WMITDIDRLA GKITVVATNK SGKTFFSSEG
MAVHPKIEEK MLELLCTDTL KAELQPDALA CLHTLREQFS RVVLHNFESE RPVFIHQGFI
TWFPFAGDRI HSTLAYLLKE VDMHPDTPGM ELTLEIGFSN LLPLLKKEIL LLPQRISDIM
DHSPDTFYTG KWGRYLPLSL KKQYVMEEEF DIKGTAAFIE RLKLVKIV
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