Gene Cpin_2056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2056 
Symbol 
ID8358208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2506454 
End bp2507803 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content43% 
IMG OID644964243 
Producthypothetical protein 
Protein accessionYP_003121752 
Protein GI256421099 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAAAT CGCTTTTACT TATTCTGTCA TTTATTTTTT CAAGTGCCGG CCTTTTTGCG 
CAAGTGCCGT TTGATAGCCT GTATAAACCC AAAAAGAGAT TTGCACGCGC CGCAGGGGAA
CTGATCGTTA CACAACTGAT CCCCTGGTCG TTTAACCGTT TTGCCCGCAA TGCCGAGTTT
GCGAAAGTCA GTTTCAAAAG TATCGGGGAA AATTTAAAAC CCTCAAGCTG GGAATGGGAT
GATAATAATT TTAAGACAAA CCAGTTTGCT CATCCTTATC ATGGTAATCT TTATTTCAGC
ACGTTTCGCA GCAACGGATA TTCTTTCTGG CAGTCTGCTC CTGCTGCATT TGCCGGCAGC
TTTATCTGGG AAATCGCGGG TGAGACCCAC AAGCCAGCTC CCAATGACTT TATTAATACC
AGCCTCGGTG GCATCGCTTT AGGAGAGATG ACTTACCGGC TGGCGAATAA AATTGTTAAC
AATCGTGCTA CAGGCGCTAA ACGTCAATTA CAGGAAGTAA TGGGACTTGT TATCAATCCG
GTAAATGGAC TGAACCGCAT TTTAAATGGA CAATGGGGAC GGGTATACGG CGTACCTGAT
AGCTCCGGAA GGATAACAGC GTATTTAAAT GTAGGGTTAC GACATTTCAA TATTCATTCC
CTTGAACAGT ACACAAATGG TCACAACGAG TTGTATTTAC GTCTGAGACT TCAGTATGGA
GATCGGTTCA GGGTGAGTAG CACCCCATTT GAGAGCTTTA ATGCCATCGT CGAAGCTGGT
GCTGGTGATT CAGCCTATCT GAATACAGTT CAGGTAACAG GGGCATTAAA AACCTGGACA
CTTCGCGAGG ACAGCAGTCA GCGGCATCTG TATACCGTTG CCATGAACTA TGACTTTATT
AAGAATAATG CATTTGAATA CGGTGGACAA AGTTTCATTT TCAAGTTATT ATCAGATTGG
CGCGCCAATC GTAAAACAAA AATCTATACA GAAATTGGTA GCGGTATCGT TGTATTAGGT
GCTGTTCCCG ACAAATATCT TTACTATGGA GAAGGCCGTA ATTATGACTA TGGTCCAGGT
ATACAACTAA CAGCGGCAGG TGGTATTAAC TTTCATGAAT GTGTTGAAGT AGAGCTGAAT
TATAAAGGTA GCAGATTTAA AACGCTTAAC GGTAGTAAGT CTACTTATAT CTTAAATACA
CTTTCGGCAG ACATGAGAGT CTACCTTCCA AAGAATTTTT CACTTGCCGC CGGTGTTGGA
CAATACACGC TCAATGGGTT TTATCGGAAA TTGAGCAATA TATCCGAAGT CTATCCCTTT
GCCCGTTTTT CAGTAGGTGT AAAACTGTGA
 
Protein sequence
MGKSLLLILS FIFSSAGLFA QVPFDSLYKP KKRFARAAGE LIVTQLIPWS FNRFARNAEF 
AKVSFKSIGE NLKPSSWEWD DNNFKTNQFA HPYHGNLYFS TFRSNGYSFW QSAPAAFAGS
FIWEIAGETH KPAPNDFINT SLGGIALGEM TYRLANKIVN NRATGAKRQL QEVMGLVINP
VNGLNRILNG QWGRVYGVPD SSGRITAYLN VGLRHFNIHS LEQYTNGHNE LYLRLRLQYG
DRFRVSSTPF ESFNAIVEAG AGDSAYLNTV QVTGALKTWT LREDSSQRHL YTVAMNYDFI
KNNAFEYGGQ SFIFKLLSDW RANRKTKIYT EIGSGIVVLG AVPDKYLYYG EGRNYDYGPG
IQLTAAGGIN FHECVEVELN YKGSRFKTLN GSKSTYILNT LSADMRVYLP KNFSLAAGVG
QYTLNGFYRK LSNISEVYPF ARFSVGVKL