Gene Cpin_2018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2018 
Symbol 
ID8358169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2460767 
End bp2461564 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content46% 
IMG OID644964205 
Producthypothetical protein 
Protein accessionYP_003121714 
Protein GI256421061 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0100104 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCAC TGAAACACCT GGCAAGTGGT ATGCTGTTTT TAAGTACCGC GTTATTGATG 
TCTGCCTGTT CGAAAGACGA CAATCAGGGT AAAGCCCGTA TACAGGTCGC ACTGACCGAT
GATCCCGGAG ATTTTAAAGC TGTTTACATC GATGTTCAGG AAGTGAACGT CAATTACAAT
GACAGCGATG ACAATGGCTG GCAGCCATTA CCTGGCATGA AAAAGGGCCG GTATAACCTG
CTGACGCTCG TTAATGACAA GGATACCGTA CTGGCGGATG CGGAAATCAA TTCCGGTACT
ATTAAGGAGA TCAGACTTGT ATTAGGCGAT GATAACTGGG TGGTGACCAA CAATGGTGAT
TCCATTAAGT TACAGACGCC CAGCGGACAG TCTTCCGGCG TAAAGTTAAA GATCAACATG
CCGGTATCTG GTGGTATTCT TTACAAACTG CTGCTGGACT TTGATGTGGC AAAATCTATA
CACGAAGCGG GCAATTCAGG GAAATATATC CTGAAACCTG TTATCAGAAC TGTACTGGAA
GCACAGGGTG GTAGTATACA GGGCGTCGTA CTGCCGGCAG TGTTGCCTTC TGCTGTATTG
TTGCTGAACG GACAGGATAC GGTGGCAAGC ACCTATTCCG GTATTGGCGG CGCTTATTTC
CTGAAAGGGA TCGCTGCAGG TAGCTATTCA CTGCACTATA TTTCTATTGA TTCTACGCTG
AAACCAGCCG TAAAACAGAG TGTCGTAGTA GAAACAGGTA AAGTAACGAA AATAGATACA
CTGACTTTAA TACGTTAG
 
Protein sequence
MPALKHLASG MLFLSTALLM SACSKDDNQG KARIQVALTD DPGDFKAVYI DVQEVNVNYN 
DSDDNGWQPL PGMKKGRYNL LTLVNDKDTV LADAEINSGT IKEIRLVLGD DNWVVTNNGD
SIKLQTPSGQ SSGVKLKINM PVSGGILYKL LLDFDVAKSI HEAGNSGKYI LKPVIRTVLE
AQGGSIQGVV LPAVLPSAVL LLNGQDTVAS TYSGIGGAYF LKGIAAGSYS LHYISIDSTL
KPAVKQSVVV ETGKVTKIDT LTLIR