| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2009 |
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| Symbol | |
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| ID | 8358160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 2449519 |
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| End bp | 2451765 |
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| Gene Length | 2247 bp |
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| Protein Length | 748 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644964196 |
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| Product | Cellulase |
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| Protein accession | YP_003121705 |
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| Protein GI | 256421052 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2730] Endoglucanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.428719 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0728263 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA ATGGATCTAA CCTTTCTTTC CGGCTGGCTG CATTATTACT ATGCCTGCTG
GGGTTTAGTT CACAAACACA CGCACAGACG CCCGTTCAGA AAAACGGTCA GTTGCAGGTG
ATCGGTACTA AATTATGCAA TCAGTATGGC AATCCGATCC AGCTCAGAGG CATGAGCACA
CATGGTATCC AATGGTATGG CTGGGGAAGC TGTCTGACAG CTGCTTCACT CGATGCGCTG
GCATACGACT GGGGCGCCGA CATCCTGCGT ATCTCACTCT ATGTACAGGA AGGCGGTTAT
GAAACCGATC CTACCGGCTT TACCAATCAG GTGAACCGCC TCATAGAAGA AGCTACCGCA
CGTGGTATGT ATGCACTCGT TGACTGGCAT CAGCTCACAC CAGGCGATCC TAACGCCAAC
CTGGCCAGAG CAAAGACTTT CTTCTCTGCC ATCGCCAACA CACACAAGAA CAAAAACAAC
ATCATCTACG ACATCTGTAA TGAGCCCAAC TCAGGCGCAA CCTGGGCGAA GATCAAAACT
TACGCGGATC AGATGATTCC GTTTATACGC GCTATCGACA ATGACGCCGT CATACTCGTA
GGTACACACG GATGGTCTAC TATGGGCCTC TCCGGTGATG GTTCGCTGCA GGATATTTTC
AACAATCCGC TGACACATGG TAACGTGATG TATACATTCC ATTTCTATGC AAAAGATCAT
CGTACCGCAT ATCTCAATCA GCTGAATACT GCTTCTGACA GACTGCCTGT CTTCGTAACA
GAATTCGGTA CGCAGGAAGC CAGCGGAGAC GGCGCTAATG ACTTTGCCAT GGCGCAACAG
TACATCGATC TGATGGCACG TAAGAAGATC AGCTGGACCA ACTGGAACTA CTCTGACGAC
TTCCGTTCCG GCGCTGTATG GATAACAGGT ACCTGCTCCA ATGGCCCGTG GACAACCGCC
AGACTAAAAC CTGCCGGCGC ATGGATACGT GAGCGTATAC TGAATCCTGC GGATGATTTT
CCAGGAGGAA ATGTATGTGT GCCGGTATCT GCCAGCGCAA ACGATGGTAA CGTACCAGCC
AACGTACAGG ATAATGATTA TAACACCCGC TGGTCAGCAG AAGGCGACGG TCAGTGGATA
CAATTCTGCC TGGACAACAC CACTACTGTA AGCGGTGTCA ATATTGCATT CTATAGTGGT
ACTGTAAGAC GCACCTTCTT CGATATCCTG ACCAGCACAG ATGGCAGCAA CTGGGTATCC
GCAGCAAGCG GTCTGCAAAG CAGCGGTACC TCCAATGCAT TGGAAGCATT CACCTTCACA
CCACGTAGTG CAAAACATGT ACGGATCGTG GGTCACGGTA ACAGTGCAAG TGCCTGGAAT
AGTCTGACAG AAGTACGTAT CATTACCACT TCTTCCACAC AACAATCAAC ACTCGCACCT
TTACAGGATG CGTATGTAAG AAACGGCGAC TACGCAGCTA TTACACATGG TACTACTGAT
GCAACAGTAT TGGCATCTAA AATAAACGCA ACGGCTACTA CAGGCTACGA CAGACAAAGC
TTCCTTCGCT TTGATGTAAG TGGTGTTAAC AACATCTCTT CTGCCGTGTT AAAAGTATAT
GGTAAAATTG AAGATAACCG CGTTGCGAAT CTGCCAATAG GCGTGTATGC AGTTGCTAAC
ACAAGCTGGA CAGAATCCGC ACTCACCTGG AATAATAAAC CTGCTACAGG TAGCACTGCA
TTACAGACAG CCGTAGTGAC TGACTCAGTT GGCAGATACT ATTCATGGGA TATCACCAAC
TATGTACAGA CGGAAAAAGC AGCCGGACGT AATGGTATTT CCCTGGCATT ACTGAGCAAT
ACCGGCGCTG ATCCACGTGT CATCTGGAGA TCTAAGGAAG CAGGACTGAC AGCTCCTCAG
CTGGTGATCG CTTCCACTCC AACAGCCGCT AAACTGGCAG CCAGTGCACC AGAAAAAGCA
CCTGTAAAAC TGATTACTAC ACTGACCAGT TATCCAAATC CATTCGATGA CAACAGCACC
GTTAGTTTCT TCCTGGATAA ACCAGCAGAC GTATTACTGG CGGTATATGA CATCAATGGT
AAACAAGTGG CAATACTGAA ACGCGGCCGT CTGGATGCGG GTCAATACAA TACCAGCCTC
GCAGCCAGCC ATCTGCCAAA AGGTATTTAT ACACTGAAAC TGACCTATGG AGAGAAGGCA
ATAACAAGGA AGGTAGTGAA ACAATAA
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| Protein sequence | MKKNGSNLSF RLAALLLCLL GFSSQTHAQT PVQKNGQLQV IGTKLCNQYG NPIQLRGMST
HGIQWYGWGS CLTAASLDAL AYDWGADILR ISLYVQEGGY ETDPTGFTNQ VNRLIEEATA
RGMYALVDWH QLTPGDPNAN LARAKTFFSA IANTHKNKNN IIYDICNEPN SGATWAKIKT
YADQMIPFIR AIDNDAVILV GTHGWSTMGL SGDGSLQDIF NNPLTHGNVM YTFHFYAKDH
RTAYLNQLNT ASDRLPVFVT EFGTQEASGD GANDFAMAQQ YIDLMARKKI SWTNWNYSDD
FRSGAVWITG TCSNGPWTTA RLKPAGAWIR ERILNPADDF PGGNVCVPVS ASANDGNVPA
NVQDNDYNTR WSAEGDGQWI QFCLDNTTTV SGVNIAFYSG TVRRTFFDIL TSTDGSNWVS
AASGLQSSGT SNALEAFTFT PRSAKHVRIV GHGNSASAWN SLTEVRIITT SSTQQSTLAP
LQDAYVRNGD YAAITHGTTD ATVLASKINA TATTGYDRQS FLRFDVSGVN NISSAVLKVY
GKIEDNRVAN LPIGVYAVAN TSWTESALTW NNKPATGSTA LQTAVVTDSV GRYYSWDITN
YVQTEKAAGR NGISLALLSN TGADPRVIWR SKEAGLTAPQ LVIASTPTAA KLAASAPEKA
PVKLITTLTS YPNPFDDNST VSFFLDKPAD VLLAVYDING KQVAILKRGR LDAGQYNTSL
AASHLPKGIY TLKLTYGEKA ITRKVVKQ
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