| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1986 |
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| Symbol | |
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| ID | 8358137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2425357 |
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| End bp | 2426868 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644964174 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_003121683 |
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| Protein GI | 256421030 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.680034 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATA AAAATCGTGT ATACGTCTTC GATACTACCC TCCGTGATGG CGAACAGGTT
CCTGGTTGCC AGCTGACAAC CGTCGAAAAA ATCGAGGTAG CTAAGGAACT GGAACTGCTG
GGAGTAGATG TTATTGAAGC TGGATTCCCG ATCTCCAGCC CTGGTGATTT CCAGAGCGTA
GTTGAAATAT CCAAAGCAGT CAGCGAACCG GTGATCTGTG CGCTGACACG TGCTAATACC
ATGGATATCG ATGCCGCTGC TGAAGCACTT CGCTTTGCAA AACGCAAACG TATTCATACT
GGTATCGGTG CTTCCGATAT GCACATCAAA TATAAATTCA ATAGCACCCG TGAGGACATT
CTGAAACGTG CAGTAGATGC AGTGAAGTAT GCCCGCAAAT TCGTGGATGA TATCGAGTTT
TATGCAGAAG ATGCCGGTCG TGCTGACAAC GAGTATCTGG CAAGAATGAT CGAAGCCGTT
ATCGGTGCAG GTGCTACTGT CGTAAACATT CCTGATACGA ATGGTTACTG TCTGCCTGAC
CAGTATGGTG CGAAGATCAA ATACCTGATG GATAACGTAT CCAACATTGA TAAAGCAATC
ATCTCCGTGC ATTGCCATAA TGACCTGGGG CTGGCTACTG CCAATACCAT TGCAGGTGTT
ATGAACGGTG CGCGTCAGGT AGAATGTACC ATCAATGGTA TTGGTGAGCG TGCCGGTAAC
ACTTCTCTGG AAGAAGTAGC GATGATCCTG AAAACGCATC ACGCGATGGG TTATCATACC
GGTATCAATT CAAAACGTAT CTACGGTATC AGTAACATGG TTGAGACAAT GATGCGTATG
CCGGTACAGG CTAACAAAGC GATCATTGGT CGTAACGCAT TCGCACACAG TTCCGGTATT
CACCAGGATG GCGTGTTGAA ACATCGTGAA AACTATGAGA TCCTGAATCC GGAGGATGTA
GGTATAGAAT CCAATGCGAT CATCCTGACT GCACGTAGCG GCCGTCATGC GTTGAAGCAT
CACCTGGAGC GTCTGGGTTA CAAGCTGGAT AAAATCAACC TGGATGAAGT TTACCAACGC
TTCCTGGAAA TGGCAGACAA GAAGAAAGAC ATCAATGATG CTGATCTGCA GGAATTGATG
GGTAATGGTG ATGACAAGAA TTTCGATGAT GATAAAGCGA TCAAAGTTAC TTTGCTGCAG
GTAGTATGTG GTGATCCACT GCGTCCGATG GCAACTGTAA AACTGAAGAT CAATGGTGAA
GAAAAAGAAG CCAGCTCCGC AGGTAATGGT CCTGTAGATG CAGCTATCAA TGCTATTCAC
GAGATCATCA AAGACCAGAT TGATATTGAT GAATTCAATA TCCAGTCAAT GCGTGGTGGT
AGTAAAGATG TAAGTAAAGT AAACATGCGT GTAAAACACA ATGGCCAGTC TTATTATGGC
TACGGTTACT CTACTGATAT CGTAAATGCC TCTATGCATG CCTATGTAGA TGCGCTGAAC
AAGATCTATT AA
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| Protein sequence | MSDKNRVYVF DTTLRDGEQV PGCQLTTVEK IEVAKELELL GVDVIEAGFP ISSPGDFQSV
VEISKAVSEP VICALTRANT MDIDAAAEAL RFAKRKRIHT GIGASDMHIK YKFNSTREDI
LKRAVDAVKY ARKFVDDIEF YAEDAGRADN EYLARMIEAV IGAGATVVNI PDTNGYCLPD
QYGAKIKYLM DNVSNIDKAI ISVHCHNDLG LATANTIAGV MNGARQVECT INGIGERAGN
TSLEEVAMIL KTHHAMGYHT GINSKRIYGI SNMVETMMRM PVQANKAIIG RNAFAHSSGI
HQDGVLKHRE NYEILNPEDV GIESNAIILT ARSGRHALKH HLERLGYKLD KINLDEVYQR
FLEMADKKKD INDADLQELM GNGDDKNFDD DKAIKVTLLQ VVCGDPLRPM ATVKLKINGE
EKEASSAGNG PVDAAINAIH EIIKDQIDID EFNIQSMRGG SKDVSKVNMR VKHNGQSYYG
YGYSTDIVNA SMHAYVDALN KIY
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