| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1985 |
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| Symbol | |
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| ID | 8358136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2424217 |
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| End bp | 2425296 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644964173 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_003121682 |
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| Protein GI | 256421029 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.478678 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGCGTAG ACAAAAAGAT ACTGGTAATT CCCGGAGATG GTATAGGACA AGAGGTGACA
GCCTGGGGTC AGAAAGTATT GGAAACAATT GCTGTAAACT ACAAGCACAA TTTTGTTTTT
GAAGAAGGCA TAATGGGGCA TGTTGCCATC GAAGCTACCG GTACTCCGCT GCCTGACGAA
ACACTGGAAA AAGCCCGCAA AAGCGATGCG ATCCTATTTG GTGCTATCGG TCATGCGAAA
TATGACAATG ACCCTACACT GAAAGTGCGT CCTGAGCAGG GATTGCTGAA AATCCGTAAG
GAGTTGGGTC TCTACGCAAA TCTGCGGCCT ATTAAGTTGT TTGATGAACT GCTGGAAGCA
TCCAGCATTA AACCGGAAAT ACTTCGTGGA GCAGATATCC TGTTCTTCCG TGAGCTGACC
GGGGATGTAT ACTTCGGTGA GAAGAAACGT TCAGAAGACC GCAATACTGC ATCTGACCTG
ATGATCTATC ACCGTTATGA AGTAGAACGT ATCGCCCGTA AAGCATATGA AGCTGCACGT
TCCCGCCGTA AAAAACTGTG TTCTGTAGAT AAAGCAAACG TACTGGAATC AAGCCGTCTG
TGGCGTGAAG TGGTGCAGGA ACTGGCTAAA GAATACAGTG ATGTGGAAAC AGAACATATG
TTCATCGATA ACGCTGCTAT GCAGCTGGTG AAAGATCCGA AACGTTTTGA TGTGGTGCTG
ACAGCTAACC TGTTTGGCGA CATCCTGACG GACGAGGCTT CCCAGATCGC AGGTTCTATG
GGTATGCTGG CATCAGCATC CATCGGCGAC AGCGTTGGTT TCTATGAGCC TATTCACGGT
TCTGCGCACG ATATCGCTGG TAAAGGCATT GCCAATCCGC TGGCGTCTAT CCTGTCCGCA
GCACTGATGC TGGATATTTC TTTCGGACTG AAGAACGAAT CCCTGCGCGT GATCAAAGCT
GTTGAAGCTA CCCTGAAACA AGGTTACCGT ACAATGGATA TTGCTAACAA GCATACGGAA
AATCACTACG TAATGGGTAC AGATGCAATG GGTGCAAAAG TGCTGGAAAA TCTGAACTGA
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| Protein sequence | MGVDKKILVI PGDGIGQEVT AWGQKVLETI AVNYKHNFVF EEGIMGHVAI EATGTPLPDE
TLEKARKSDA ILFGAIGHAK YDNDPTLKVR PEQGLLKIRK ELGLYANLRP IKLFDELLEA
SSIKPEILRG ADILFFRELT GDVYFGEKKR SEDRNTASDL MIYHRYEVER IARKAYEAAR
SRRKKLCSVD KANVLESSRL WREVVQELAK EYSDVETEHM FIDNAAMQLV KDPKRFDVVL
TANLFGDILT DEASQIAGSM GMLASASIGD SVGFYEPIHG SAHDIAGKGI ANPLASILSA
ALMLDISFGL KNESLRVIKA VEATLKQGYR TMDIANKHTE NHYVMGTDAM GAKVLENLN
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