| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1984 |
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| Symbol | |
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| ID | 8358135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2423520 |
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| End bp | 2424119 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644964172 |
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| Product | 3-isopropylmalate dehydratase, small subunit |
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| Protein accession | YP_003121681 |
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| Protein GI | 256421028 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
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| TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.440019 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTAAGA CTTTTCAACA CCTTGTATCC ACCGCAGTTC CTATTGCGAT TGAAAACATT
GATACAGACC AGATCATCCC TGCCCGCTTT CTGAAAGCAA CGACAAGGGA TGGTTTCGGA
GAAAATCTCT TCCGTGACTG GCGCTTTGAC ACTAATAATG AGCCTAAGCA AGACTTTATC
CTGAACAATC CGATCTACAA AGGTCAGATA CTGGTAGCAG GTAAAAACTT TGGTTGCGGT
TCATCCCGTG AGCACGCGGC ATGGGCTATC GGCGACTATG GTTTCAAAGT TGTGATCAGC
AGTTTCTTTG CTGATATCTT CAAGAACAAT GCGCTGAATA ACTTCATTCT GCCGATCACT
GTGACGGACG AATTCCTGGA CAAGATCTTC AAAGCGATTG AAACAGATCC TGCTGCTCAA
CTGGAAATTG ACCTGGAAAA ACAGTCACTG AAGATCGTAG CTACCGGTGA AGAAATTTCT
TTCGACATCA ATCCGTATAA GAAAGCCTGC CTCATTAATG GCTATGACGA TATTGACTAC
CTGTTGAGCC TTCGTAAAGA GATTGAATCA TACGAAGCCA GCCGTGAGTT TAATTTTTAA
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| Protein sequence | MSKTFQHLVS TAVPIAIENI DTDQIIPARF LKATTRDGFG ENLFRDWRFD TNNEPKQDFI
LNNPIYKGQI LVAGKNFGCG SSREHAAWAI GDYGFKVVIS SFFADIFKNN ALNNFILPIT
VTDEFLDKIF KAIETDPAAQ LEIDLEKQSL KIVATGEEIS FDINPYKKAC LINGYDDIDY
LLSLRKEIES YEASREFNF
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