| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1971 |
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| Symbol | |
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| ID | 8358122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 2406308 |
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| End bp | 2408986 |
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| Gene Length | 2679 bp |
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| Protein Length | 892 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644964159 |
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| Product | AsmA family protein |
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| Protein accession | YP_003121668 |
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| Protein GI | 256421015 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.457681 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0391828 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAAAA AGATCCTCAA AATTGTAGGA ATTTTCTTGC TGGTATTGGT TATCGCAGCT
ATTGCCATTC CATACTTTTT CAAGGGCAAG ATCATGTCTA TCGTCAAAAC AGAGCTGAAT
AAACAACTTG TAGCTGATGT CGACTTTAAA GATGTGGATA TCAGCCTGAT AAGGCACTTC
CCAAGGCTGG CTGTAGCCCT CGAAGACCTG AGCGTAGTAA ACAGAGCGCC TTTCGCCGGC
GATACCCTGT TTGCCGTTAA GAAAATCGAT CTGGCACTCA ATCTCATGAG CGTAATCAAA
GGCGATAAAA TGGATATCTA CAATGTGGAT ATCGTAGCGC CACGCATACA TGCTATTATC
AATAAACAGG GACTGGTGAA CTGGGATATT ACAAAACCAG ACACAGCCCA GACCACTCCG
GCAGATACTG CCACTACCAA ATTCGCCCTC AATCTACAGC AATACAGCAT CGAAGATGCT
ACCATCCGCT ATGATGATGA ACAAGGTGAC ATGGGTATGC TGATCGAAGG CCTGAACCAC
CAGGGTAAAG GTGACTTCAC ACAGGATCTG TTCACGCTCC AGACAACCAC CCAGGCTGAA
GGCGTTACCT TCCGCTATGG TCTTATCCCC TACCTGCTGC GCACCAAAAC AACCATGGAT
GCAGATATTC AGGTAGATAA TAAAACCAGC ACCTATACCT TCCAGAAAGG TAAAGCCACA
CTGAACAATC TCGAACTGGC CTTCCAGGGC TTCTTTAAAC TCATTGATGA CAGCACCTAC
GGCATGGACC TCACCATGAA AGCGCCATCC ACACAATTTA AAGACATCCT CTCCCTGGTG
CCCGCTATCT TCATGCAGGA TTTTGATAAA ATCAAAACTT CCGGTACCGC TGCCTTCGAC
GGTTACGTAA AAGGTACTTA CAGCGCTACC CAGATGCCTG CTTTCGGATT AAACCTGGCT
GTTAAAGATG GTTTCTTCCA ATACCCTGAC CTCCCTAAAC CTGTAAAGAA TATCCAGGTA
AAAATGAGCG TCAACAACCC GGATGGCGTA CCTGATCATA CCATTGTGGA CATTCCTGCT
GCCCATGTAG AAATGGATAA CACCCCGCTG GATATGCGCC TCCTGGTGAA AACACCGATC
TCCGACATGT ATGTAGACGG CGCTGCAAAA GGTAAACTCG ACCTGTCAAA AGTATCTCAG
TTCGTAAAAC TGGAAGCTGG TACCGCGTTG AGTGGTATCG TAGATGCGGA TGTTTCTGCA
AAAGGGAACA TGAGCGCCAT CGAAAAACAG GCATATGATA AATTCTACGC TGCCGGTAGC
ATCCTGATCA GCGATCTGTT GTACCGTAGC AAAGATTATC CGGACGGTGT GAAGGTAAAT
ACCCTGGCCA TGCAGTTCAA TCCGAAGAAT GTGACAGTAT CTAAATTTGA CGGACAATAC
ATGGGCACCA ACTTCCAGGC AAACGGTGAA GTGAATAATA TGCTGGCCTA TATGCTGAAG
AATCAGCCGC TGGATGGTAA ACTGGCTGTA AAAGCAGACC AGGTAGACCT CGACAAATGG
ATGGGTACCA CGGAAACCAC CGCTGCCGCA ACACCAGCCG ATACGGCCAG TGCTCCTTTT
GCTGTTCCGG CTAACCTGAA CCTCGCTTTA CAGGCACAGG TAGATAAAGT TCACTACGAT
AAACTCGACA TGTCTAACCT CTCCGGTAAC CTGTTGCTGA AAGACGAAAC CGTTTCCATG
CAACAGATCA AGGCAAATGC CTTACAGGGT AATATGGAAG TAAATGGTAG CTACAGTACA
AAAAACAGTA AGACCAACCC GGATATCAAC ATGGCTTACA GTGTACAGAA TGTAGACGTA
CAACAGACAT TCAACGCTTT CAATACCGTT CAGGCCCTGA TGCCGGTGGC CAAATTCCTG
AATGGTAAAA TCAACTCCCA CCTGGAACTG ACCGGTAAAC TGGGGCAGGA TATGATGCCT
TTACTGAGCA GCCTCACAGG TGACGGTAAC CTGCTGGTAC TGGAAGGCGC CCTGCAGAAG
TTTGGTCCGA TAGACCAGCT GGCAAGCACC CTGAATGTAT CTCAACTGAA AAACTTCTCC
CTGAGAGATA TCAAAACCTA TTTCGCTTTT GAAAACGGAC GCGTAAAGGT AAATCCGTTC
AAAGTGAACG TCAGCAACAT CAGTATGCTG GTAGGTGGTT CCCACGGTTT TGACCAGTCA
CTGGACTATA CCCTGCAGAT GACCCTGCCG CGCAGCGTGA TCGGAAAACA GGGAGATGCC
CTGGTGACAA GTCTGGCTTC ACAGGCGAGC GCTAAAGGTA TCCCTGTTAA TATCAGCGAT
AGTATTCACC TGAACGTGTT GCTCGGTGGT AACATCATGA AACCAACATA CAAGACCGAC
CTCCAGGAAA CAACCTCCGG TACACTCAAT AACCTGAAAG ATCAGGCAAC CACTCTCGTA
AAAAATAAGG TAGACACCGT GAAAACAGCC CTCAAGGATT CACTGAATGC TGCCAAAAAT
AACGCCGTTG CCGGTCTGAA AGACCAGATC ACCAAACAGA TCACAGGTCA GAAAGATACT
ACCGGAAATA AGGCACAACC TGTGCAGAAT GCCGGTAAAC AAGCGGAACA AGCGGTAAAA
AGTACCATCG GAAATATCTT TAAAAAGAAA AGTAACTAA
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| Protein sequence | MLKKILKIVG IFLLVLVIAA IAIPYFFKGK IMSIVKTELN KQLVADVDFK DVDISLIRHF
PRLAVALEDL SVVNRAPFAG DTLFAVKKID LALNLMSVIK GDKMDIYNVD IVAPRIHAII
NKQGLVNWDI TKPDTAQTTP ADTATTKFAL NLQQYSIEDA TIRYDDEQGD MGMLIEGLNH
QGKGDFTQDL FTLQTTTQAE GVTFRYGLIP YLLRTKTTMD ADIQVDNKTS TYTFQKGKAT
LNNLELAFQG FFKLIDDSTY GMDLTMKAPS TQFKDILSLV PAIFMQDFDK IKTSGTAAFD
GYVKGTYSAT QMPAFGLNLA VKDGFFQYPD LPKPVKNIQV KMSVNNPDGV PDHTIVDIPA
AHVEMDNTPL DMRLLVKTPI SDMYVDGAAK GKLDLSKVSQ FVKLEAGTAL SGIVDADVSA
KGNMSAIEKQ AYDKFYAAGS ILISDLLYRS KDYPDGVKVN TLAMQFNPKN VTVSKFDGQY
MGTNFQANGE VNNMLAYMLK NQPLDGKLAV KADQVDLDKW MGTTETTAAA TPADTASAPF
AVPANLNLAL QAQVDKVHYD KLDMSNLSGN LLLKDETVSM QQIKANALQG NMEVNGSYST
KNSKTNPDIN MAYSVQNVDV QQTFNAFNTV QALMPVAKFL NGKINSHLEL TGKLGQDMMP
LLSSLTGDGN LLVLEGALQK FGPIDQLAST LNVSQLKNFS LRDIKTYFAF ENGRVKVNPF
KVNVSNISML VGGSHGFDQS LDYTLQMTLP RSVIGKQGDA LVTSLASQAS AKGIPVNISD
SIHLNVLLGG NIMKPTYKTD LQETTSGTLN NLKDQATTLV KNKVDTVKTA LKDSLNAAKN
NAVAGLKDQI TKQITGQKDT TGNKAQPVQN AGKQAEQAVK STIGNIFKKK SN
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