Gene Cpin_1951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1951 
Symbol 
ID8358102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2380384 
End bp2380878 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content45% 
IMG OID644964139 
Productprotein of unknown function UPF0153 
Protein accessionYP_003121648 
Protein GI256420995 
COG category[R] General function prediction only 
COG ID[COG0727] Predicted Fe-S-cluster oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAAT TACTTATTAA CTGGGAACAG AAAGCCCAGG AGCAGCAGAA GGCCAACAAG 
CAGTTCCTGC AAAAACTACA GACAAAGCGG GGAAGGGGCG TAGAGAAGTT ACTGCCGGAT
ATGCACGATG AAGCTTTCAG TCATGTGGAT TGCCTGAAAT GCGCCAATTG CTGCAAAACG
ATCAGCCCGC GCTTTAAAAT GCCCGATATC AAACGTATCT CCAAATACCT GGGCATGAAA
GAATCTGCAT TTATCGACCA ATACCTGCGG ATGGATGAAG ACGGGGATTA TGTCGTGAAA
TTCAGTCCAT GTCCTTTCCT GGATGCTGAC AACTATTGCA GCATTTATGA TGCCCGTCCC
GGGGATTGTG AAAATTACCC TTATACAGAC AGCTTTGATT TTATCAAGCG GCCCAATATT
ACATACCTGA ACAGTACGAT CTGTCCTGCA GTATTTTATG TGCTGGAAAA ACTGAAGAAA
GTCACCAAAC TCTAG
 
Protein sequence
MDELLINWEQ KAQEQQKANK QFLQKLQTKR GRGVEKLLPD MHDEAFSHVD CLKCANCCKT 
ISPRFKMPDI KRISKYLGMK ESAFIDQYLR MDEDGDYVVK FSPCPFLDAD NYCSIYDARP
GDCENYPYTD SFDFIKRPNI TYLNSTICPA VFYVLEKLKK VTKL