| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1935 |
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| Symbol | |
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| ID | 8358086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 2361820 |
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| End bp | 2362395 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644964123 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003121632 |
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| Protein GI | 256420979 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAAGCATA ATCAGAACAT AGAACGGGAT CGGGAATTAC TACTGGGATT AACCAGGAAT
GACGACAGAG CGCTGGCGAC CATCTATACG GAGAATTATC CTTCTATATT AAGAATGGTT
TTACAGTATA AAGGGTCTGA AGATGACGCT AAAGATCTTT TCCAGGAGGC TATGATCGTT
TTATACGAAA AAGCCCAGAA AGGAGAATTT GACCTTTATA GCAAACTGAA AACATACCTG
TATGCAGTTT GCCGTCACAT GTGGTTGAAA CGGTTACAAA CGGGAAGCTG GCAACTGCCC
CTCCCCGAAG AACTGGAAGA GGTACTACCC GCCGATGACA CAAACGGCAT CGCCGAGCAC
GAAGAGAAAG ACCAGCAGTT CAGAATCATG GAAAAGGCAA TGGGCAGCAT GGGGGAACCC
TGCAGAACCA TCCTTGAAGA TTATTATGTC AGGAAACTCT CGATGCAGGA CATTGCTGAG
AAATTCGGTT ACACGAACTC AGAAAATGCC AAGAATCAGA AGTATAAATG CCTGATGCGA
CTCAAGAAAC TATTTTTCGA ACAATATAAA TCTTAG
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| Protein sequence | MKHNQNIERD RELLLGLTRN DDRALATIYT ENYPSILRMV LQYKGSEDDA KDLFQEAMIV
LYEKAQKGEF DLYSKLKTYL YAVCRHMWLK RLQTGSWQLP LPEELEEVLP ADDTNGIAEH
EEKDQQFRIM EKAMGSMGEP CRTILEDYYV RKLSMQDIAE KFGYTNSENA KNQKYKCLMR
LKKLFFEQYK S
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