| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1927 |
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| Symbol | |
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| ID | 8358078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2353302 |
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| End bp | 2355008 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644964115 |
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| Product | SSS sodium solute transporter superfamily |
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| Protein accession | YP_003121624 |
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| Protein GI | 256420971 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4146] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0029053 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.303256 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAGA GTTTACAATT CCTCGATTAT GTTGTTTTCT TAGTGTATTT CGTGATTGTT
GCCGGTTACG GTCTCTATAT CTACAAAAAG AAAAAACGCG AAACAACAGA TTCCAAAGAC
TTCTTCCTGG CCGAGGGTTC CCTTACCTGG TGGGCTATTG GCGCTTCCCT GATTGCTTCC
AACATTTCTG CGGAGCAGTT CATCGGGATG GCCGGTTCCG GTTTTAACAT AGGTCTGGCT
ATCTCCACAT ATGAGTGGAT GGCGGCTGCA ACGCTGATCA TTGTTGCGGT TTTCTTCCTG
CCAATCTATC TGAAGAATAA GATCTATACC ATGCCGCAGT TCCTGCTGAC CAGGTATAAT
AAAACGGTAA GTACGATCAT GGCCGTCTTC TGGCTGTTGC TGTACGTGGT GGTAAACCTG
ACTTCTATCC TTTACCTGGG TGCACTGGCG GTGAATACAA TCTCCGGTAT TCCTTTCTTC
GTGTGTATGA CCCTGATTGC GGTTTTTGCG ATCATAATCA CACTGGGTGG TATGAAGGTA
ATTGGTTATA CAGACGTTAT CCAGGTGTTC TTCCTGATCT TAGGTGGTCT GGTAACGACT
TATCTGGCAT TGAGCCTGGT ATCAGAGCAT TTCGGTGAAA CCGGTGTAAT GAAAGGCTTC
TCCCTGATGA CTAAAAATGC AGAAGAGCAT TTCCATATGA TCCTGAAAAA GGATAACCCG
CATTACCTTG ATCTACCCGG TCTCACCGTA CTGGTAGGTG GTATGTGGAT CGTAAACCTG
AACTATTGGG GTTGTAACCA GTACATTACA CAACGTGCAT TGGGTGCAGA TCTGAAAACA
GCGCGCAGCG GTCTGCTGTT TGCCGGTTTC CTGAAACTGC TGATGCCTGT GATCGTGGTA
TTGCCTGGTA TCGCAGCTTA TGTATTATAT AAAGAAGGCG TGTTCTCCTC TGAAATGATG
AAAGCTGGTG AACTGAACCC TGACAACGCT TACCCAGTGC TGATGAACCT TCTGCCTGCC
GGTATGAAAG GTCTGGCTTT CGCAGCGCTG ACAGCAGCGG TGGTAGCGTC TCTGGCAGGT
AAAGCCAACA GTATCTCTAC TATCTTCTCT CTCGACATCT ATAAAGAAAT CTTCAACAAG
TCAGCAGGTG AAAAAGAGAT CGTGAATGTA GGCCGTGTTG TGGTAATTGT TGCCATGATC
CTCGCTATCA TTATCTCTCC GTTCCTGGGT ATCGATAAAA AAGGTGGTTT CCAGTTCATT
CAGGAATACA CCGGCTTCGT ATCGCCAGGT ATCTTCGCGA TGTTCCTCTT AGGTTTCTTC
TGGAAAAAGA CGACCTCCAA TGCGGCATTG TTCGCAATGA TCGGTGGTTT CTTAATGTCT
ATCTTCCTGA AATTCCTGCC TAACTGGACT GACCTGTCTT CACTGTATGA CCTGGGTATG
GCAGTACCTA ACGCAGCAGG CGTTTATGAA ATTCCGTTCC TCGATCGTAT GGGTATCGTG
TTTGCCGTGT GTGTGGTAGG TATGATCATT ATCTCTATCG CGGCTCCTGC CAAGAAACAG
GTGATTGTTG GTGGTACGCT GGTAACTGCG GGTGAATCAA AAGGACTGGA AGTGGATGCT
TCCATGTTCA AACCTTCTAC CGCATTCACC GTAATCGCAT TGCTGATATG TGGTATCCTG
ACAGCGCTGT ACACTATCTT CTGGTAG
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| Protein sequence | MQKSLQFLDY VVFLVYFVIV AGYGLYIYKK KKRETTDSKD FFLAEGSLTW WAIGASLIAS
NISAEQFIGM AGSGFNIGLA ISTYEWMAAA TLIIVAVFFL PIYLKNKIYT MPQFLLTRYN
KTVSTIMAVF WLLLYVVVNL TSILYLGALA VNTISGIPFF VCMTLIAVFA IIITLGGMKV
IGYTDVIQVF FLILGGLVTT YLALSLVSEH FGETGVMKGF SLMTKNAEEH FHMILKKDNP
HYLDLPGLTV LVGGMWIVNL NYWGCNQYIT QRALGADLKT ARSGLLFAGF LKLLMPVIVV
LPGIAAYVLY KEGVFSSEMM KAGELNPDNA YPVLMNLLPA GMKGLAFAAL TAAVVASLAG
KANSISTIFS LDIYKEIFNK SAGEKEIVNV GRVVVIVAMI LAIIISPFLG IDKKGGFQFI
QEYTGFVSPG IFAMFLLGFF WKKTTSNAAL FAMIGGFLMS IFLKFLPNWT DLSSLYDLGM
AVPNAAGVYE IPFLDRMGIV FAVCVVGMII ISIAAPAKKQ VIVGGTLVTA GESKGLEVDA
SMFKPSTAFT VIALLICGIL TALYTIFW
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