| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1924 |
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| Symbol | |
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| ID | 8358075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2349552 |
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| End bp | 2350808 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644964112 |
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| Product | threonine dehydratase |
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| Protein accession | YP_003121621 |
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| Protein GI | 256420968 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form
[TIGR02079] threonine dehydratase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.14942 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.18848 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCCAGG TACTAACAAG CGTGAATCCG CTCAACATAC TCGATGCAGC GGTGAAGTTA
AAACCTGTGG TGAACCGTAC CCCGCTTACT TACAGCGCCA CGCTCTCCCG CAGGTACAAT
GCAGATGTCT ATCTCAAAAG AGAAGACATG CAGATTGTAA GATCTTATAA ATTGCGTGGG
GCATACAACC TGATTAGCAG CCTGGATAAA GAAACGCTGT CAAAAGGAGT AACCTGTGCC
AGCGCGGGTA ACCATGCGCA GGGCTTTGCC TATGCATGCC GCCAGCTGGA TATTAAAGGC
GTGTGTTTCA TGCCGATCAT TACGCCGAAA CAAAAAGTCA ACCAGGTAAA TATGTTCGGT
GGCGAGAACA TCGAAATCAG ACTGGTAGGC GATACATTTG ATGATTGTGC GGCAGAAGCC
CAGGCTTTTA CCAAAGCACA CAACATGACT TTCATTCCTC CTTTCGATGA TGCAAAGATC
ATTGAAGGAC AAGGTACCGT AGCTGTAGAG ATTCTGGAAG ACCAGTCGAA GATCGATTAT
GTGTTCGTGC CTATTGGTGG CGGCGGACTC GCGGCAGGTG TCGGTACTTA TTTTAAAACA
TACAGTCCCC ATACACAGAT CATTGGCGTG GAACCGGAAG GCGCTCCGTC TATGAGTCGT
GCACTGGAGG CAGGCGAGCC AGTTACACTG AGCGAGATTG AGCGTTTCGT GGACGGTGCT
GCCGTAAAAA GAGTAGGTAC GCTGAATTTC AGTATCTGCA AAGACGTTCT GACAAAAATG
CAACTGGTAC CGGAAGGGAA AGTTTGCTCA ACTATATTAA GGCTGTACAA TGAAGACGCT
ATCGTGGTGG AGCCTGCAGG GGCACTGTCC ATTGCGGCGC TTGATTATTT CGCGAAAGAA
ATTGAAGGCA AAAAGGTAGT TTGTGTTGTC AGCGGCAGCA ACAACGATAT CGACCGTATG
CAGGAGATCA AGGAACGTTC CCTGTTATAC GAAGGTCTGA AACACTACTT CATCATCCGC
TTCGTACAGC GCCCAGGTGC ACTGAAAGAA TTCGTGAACC ACGTGCTGGG ACCTAACGAT
GATATCACCC GTTTCGAATT CATTCAGAAA CACAACAAGG AAACCGGCCC CGCACTGATC
GGTGTGGAAC TGAAAAACAG GGAGGATTAT GATATCCTGT TGGCTAATTT CCGCAAGTAT
AATATTCACT TCACTGAGCT GAACAAGGAC GATAATCTGT TCGGCTACCT GGTTTAA
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| Protein sequence | MSQVLTSVNP LNILDAAVKL KPVVNRTPLT YSATLSRRYN ADVYLKREDM QIVRSYKLRG
AYNLISSLDK ETLSKGVTCA SAGNHAQGFA YACRQLDIKG VCFMPIITPK QKVNQVNMFG
GENIEIRLVG DTFDDCAAEA QAFTKAHNMT FIPPFDDAKI IEGQGTVAVE ILEDQSKIDY
VFVPIGGGGL AAGVGTYFKT YSPHTQIIGV EPEGAPSMSR ALEAGEPVTL SEIERFVDGA
AVKRVGTLNF SICKDVLTKM QLVPEGKVCS TILRLYNEDA IVVEPAGALS IAALDYFAKE
IEGKKVVCVV SGSNNDIDRM QEIKERSLLY EGLKHYFIIR FVQRPGALKE FVNHVLGPND
DITRFEFIQK HNKETGPALI GVELKNREDY DILLANFRKY NIHFTELNKD DNLFGYLV
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