| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1904 |
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| Symbol | |
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| ID | 8358055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2326926 |
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| End bp | 2327504 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644964092 |
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| Product | peptide deformylase |
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| Protein accession | YP_003121601 |
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| Protein GI | 256420948 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTCTAC CTATAGTTGC TTACGGTCAT CCGGTATTAC GTAAAATGTG TGAAGATATA
ACCCCTGATT ACCCTCAGTT AGAGCAACTG CTTGCCAATA TGTGGGAAAC CATGTATGCT
TCAAATGGTG TGGGACTGGC TGCTCCGCAG ATCAACAGAC CTATCCGTCT GTTTGTAGTG
GACAGTGAAC AGATCATCAA CAGCCTGGAA GAAGACGAGA AGAAAGACTT CCCTGGCGAT
AACGGGATCA AACAGGCATT TATCAATGCA CATATTGTAA GCACTGCCGG AGAAGAATGG
GCGTACAACG AAGGTTGTCT CAGTATCCCG AAAGTGCGTG AAGACGTATA TCGTCCGGAA
TCCGTAACGC TGCGTTATGT AGATGAAAAA TTCCAGCCAC AGGAAAAGAC CTTTACCGGC
ATTACCGCCC GTGTGATATT CCATGAATAC GACCATATCG ATGGTAAATT GTTCATCGAT
CACCTGAAAC CATTAAAACG CAGAATGATC AAGGGTAAGC TGGAAGATAT CTCCAAAGGC
AAGATCAACG TGGATTACAA GATGATATTT CACAAATAA
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| Protein sequence | MILPIVAYGH PVLRKMCEDI TPDYPQLEQL LANMWETMYA SNGVGLAAPQ INRPIRLFVV
DSEQIINSLE EDEKKDFPGD NGIKQAFINA HIVSTAGEEW AYNEGCLSIP KVREDVYRPE
SVTLRYVDEK FQPQEKTFTG ITARVIFHEY DHIDGKLFID HLKPLKRRMI KGKLEDISKG
KINVDYKMIF HK
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