Gene Cpin_1877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1877 
Symbol 
ID8358028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2283844 
End bp2285133 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content47% 
IMG OID644964065 
Productcoenzyme F390 synthetase-like protein 
Protein accessionYP_003121574 
Protein GI256420921 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1541] Coenzyme F390 synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACATAC CCGACATTGA ACTGCAATCT ACAGCTGCCA TCAGGAAATA TCAGGAAACA 
GAAGTACTGC GCCTGCTGGG CTATCTGCGT CAGTTTTCTC CTTTCTACAG AGAATGGTTT
GCGCAGCATG GTATACAACC TTCCACTGTT AAGTCGCTGA ATGATCTCTG GCTGATACCA
CCCGTTACAA AGGAACATCT GCAACAGCAG AACTGGGATT TCCTTTGTGT GGATAAGAGC
CGGATCGCTG AATATACAAC TACTTCAGGC ACTTTGGGCA ACCCTGTGAT CATTGCATTG
ACACAGAAAG ACCAGGAGCG CCTGAGTTAC AATGAATACA TTTCCTTCTG CTGTGCCGGT
GGTACAGAAA ACGATATTTA CCAGCTGATG CTGACACTGG ACCGTCAGTT TATGGCCGGT
ATGGCTTATT ACAATGGTAT CCGTAAACTG GGCGCCGGCG TACTGCGCGT AGGTCCGGGT
GTACCTTCCC TGCAATGGGA GAATATCAGC AGGATACAGC CGACTACCAT TGTAGCAGTA
CCGTCTTTTA TTGTAAAGCT GATTGCTTTT GCGAAAGAGC ATAATATCGA TATCAACGCT
TCATCGGTGA AAAGTGCGGT ATGTATAGGG GAGAATATCC GTAATGTGGA TTTTTCGCTG
AATGTGTTGG GAAAGAAGAT CACAGAACAA TGGGACATCA AGCTGTATTC AACGTATGCA
TCCACTGAGA TGCAGACAGC TTTTACAGAA TGTAATGCAG GTCAGGGCGG GCATCATCAC
CCGGAACTAC TGTATATAGA ATTACTGGAT GATAATAATC AGCCGGTAGG ACCGAATCAG
GATGGGGAAG TCACCATTAC GACCCTGGGA GTGGAAGGGA TGCCCTTGCT GCGTTATAAA
ACAGGGGATA TCTGCCGTTA TTTTCAGGAA CCTTGTTCCT GTGGAAGGCA TACGATGCGT
TTGTCACCGG TGATCGGTCG CCGTAAACAG ATGATCAAGT ATAAAGGCAC GACATTATAT
CCGCCGGCTT TGTTTGATCT CCTGAATGAT ATGGAAGAAG TGAAGGAGTT TGTGGTGGAG
GTATTTTCCA ATGAAATAGG TACAGACGAG ATCCTGCTGC ATCTCTGGCC GGTAGCGGAA
ACAGAGGATA TAGACAGGAA GATTCGTTCG TATTTACAGG CAAAACTGCG TGTGATACCA
CAGGTACGTT ACTGTTCTCA GGCTGACGTC ATGAAGATGC AGTTCCCTGA AGGCAGCAGG
AAACCTATCA AGTTCATCGA CAGACGATAA
 
Protein sequence
MYIPDIELQS TAAIRKYQET EVLRLLGYLR QFSPFYREWF AQHGIQPSTV KSLNDLWLIP 
PVTKEHLQQQ NWDFLCVDKS RIAEYTTTSG TLGNPVIIAL TQKDQERLSY NEYISFCCAG
GTENDIYQLM LTLDRQFMAG MAYYNGIRKL GAGVLRVGPG VPSLQWENIS RIQPTTIVAV
PSFIVKLIAF AKEHNIDINA SSVKSAVCIG ENIRNVDFSL NVLGKKITEQ WDIKLYSTYA
STEMQTAFTE CNAGQGGHHH PELLYIELLD DNNQPVGPNQ DGEVTITTLG VEGMPLLRYK
TGDICRYFQE PCSCGRHTMR LSPVIGRRKQ MIKYKGTTLY PPALFDLLND MEEVKEFVVE
VFSNEIGTDE ILLHLWPVAE TEDIDRKIRS YLQAKLRVIP QVRYCSQADV MKMQFPEGSR
KPIKFIDRR