| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1844 |
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| Symbol | |
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| ID | 8357995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2249704 |
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| End bp | 2250414 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644964032 |
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| Product | two component transcriptional regulator, LytTR family |
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| Protein accession | YP_003121541 |
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| Protein GI | 256420888 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAGGT GTATAGCGGT GGATGACGAA CCACTTGCGT TGGAAATAAT CACTGATTTT
GCAAAGAAGG TGCCCTTTCT GCAACTGGTA GGCACGTTCC AAAATGCGAC CGAGGCATTG
CGCTTTCTGC AGGAAGAGCG TGTGGACCTG CTTTTCCTCG ATATTAAAAT GCCGGACATT
ACCGGTATTC AGTTGATGAA ATCCCTGAAA TATCCACCGA TGGTCATCTT TACCACCGCA
TATGGAGAAT ATGCACTGGA AGGATTTGAC CTGGAAGTGG TGGACTACCT CTTGAAGCCC
GTACCATTCG AACGTTTTCT GCGATCGGCT ACCAAAGCGC TTGAGCTCAG AAGTATGTCT
CAGCAGAAAA ACGGAGACAG CAGTAACGGG CATGTTAATG ACTACATCTT CATCAAAACA
GAATACAAGA TCATCAAGAT CAATCTGGAA GATATTTTAT TCATCGAAGC ACTGAAAGAT
TATACGAAAA TTTATACTCC TCATCAGCCG GTACTTACAC TGCGCAGCCT TAAATCATTT
GAAACACGTT TGCCTGCAGA GAAATTCATC AGGGTACACC GCTCTTATGT CGTGTCGCTG
AATAAGATCA ATTCTGTGGA AAAGAACACC GTGATGATCG CCAATCAGTC TATCCCTATC
AGTGATGGTT ACAGGGATAA GTTCTATGAC GTGATCAACC GGAACAGTTA A
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| Protein sequence | MIRCIAVDDE PLALEIITDF AKKVPFLQLV GTFQNATEAL RFLQEERVDL LFLDIKMPDI
TGIQLMKSLK YPPMVIFTTA YGEYALEGFD LEVVDYLLKP VPFERFLRSA TKALELRSMS
QQKNGDSSNG HVNDYIFIKT EYKIIKINLE DILFIEALKD YTKIYTPHQP VLTLRSLKSF
ETRLPAEKFI RVHRSYVVSL NKINSVEKNT VMIANQSIPI SDGYRDKFYD VINRNS
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