Gene Cpin_1825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1825 
Symbol 
ID8357976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2229981 
End bp2230781 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content47% 
IMG OID644964013 
ProductIndole-3-glycerol-phosphate synthase 
Protein accessionYP_003121522 
Protein GI256420869 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0134] Indole-3-glycerol phosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATA TCCTTACAGA AATAGTAGCC CATAAGCATG TGGAAGTGGC AGCCCGCAAA 
CAACAGCGGA GTGTGGAAGA GCTGGAACAG GCATCCTGGT TTAAGTGCAC CTCTTTGTCA
CTGGCGCAGT TTCTGCAGGA TCCTGCAAAG ACAGGTATCA TTGCAGAGTT CAAAAGGCGT
TCTCCTTCAA AAGGATTGAT CAACGGCGAC GTAACCGTAC AGGACGTGAC CACTGCTTAT
ACCCGCTATG GTGCATCCGG ATTATCAGTA CTGACAGATG AGAAATTCTT CGGTGGTTCT
TCTGATGATC TGCAACAGGC GCGTATACTG AATAATATTC CGATCCTGCG TAAGGACTTT
ATCGTAGACG AGTATCAGAT TGTCGAAGCA AAAGCGATCG GTGCTGACGT GATCCTGCTG
ATTGCAGAAT GTCTCACAAA AGCAGAAGTG GCCCAGCTGG CGAAGTTTGC CCACAATCTC
GGACTGGAAG TATTGCTGGA AGTACATAGC GGCGATCAGC TGGAAAAGGT GACTGATCAT
ATACAGCTGG TAGGTGTGAA TAACCGGGAT CTGACAACGT TCAATGTCGA CTTTAACCGT
TCCTGCGAAC TGGCGCCACA GATACCTGCA GATAAATGTA AAGTAGCAGA AAGTGGTATC
AGTAATACAG ATGCAATCCT TACGCTGAAA GCAGCAGGTT TCCAGGGATT CCTGATCGGA
GAACATTTCA TGCGGCAGGA AAATCCACCG AGAGCATTTG AACAATTTGT AACAGAACTG
GCCAACAAAT CAGCAAAATG A
 
Protein sequence
MKNILTEIVA HKHVEVAARK QQRSVEELEQ ASWFKCTSLS LAQFLQDPAK TGIIAEFKRR 
SPSKGLINGD VTVQDVTTAY TRYGASGLSV LTDEKFFGGS SDDLQQARIL NNIPILRKDF
IVDEYQIVEA KAIGADVILL IAECLTKAEV AQLAKFAHNL GLEVLLEVHS GDQLEKVTDH
IQLVGVNNRD LTTFNVDFNR SCELAPQIPA DKCKVAESGI SNTDAILTLK AAGFQGFLIG
EHFMRQENPP RAFEQFVTEL ANKSAK