Gene Cpin_1813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1813 
Symbol 
ID8357964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2216701 
End bp2218275 
Gene Length1575 bp 
Protein Length524 aa 
Translation table11 
GC content47% 
IMG OID644964001 
Producthypothetical protein 
Protein accessionYP_003121510 
Protein GI256420857 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGATCCG TTAAAGTAAT TATCGCTGTT TGTCTGTTCC TGCCTTTGCG TTTACTGGCG 
CAGCAGGTGA ATGTTTCTTC CGGGAAGGCA ATGACACTGG AACCGGTGCT GAAGAAGTAC
GTGGACCGGT TTAATAGTCT TGACTCGGAA TATGTGAAAA ACTATGTGAG TAATGCAGAT
GCCTTTGACT GGCTGAAAGC GAACGTACCT TTACTGGATT GTCCGGATAG TACTATCGAG
CAGACATACT ATTACAGATG GTGGACTTTC CGTAAACATC TGAAAGAAAC GCCTGATGGC
TTTATCTTCA CTGAATTTAT CACCCCTGTT AAACACGCCG GCAGGTTTAA CGCGCTTAGT
TGCGCCTTTG GGCATCACGT GTATGAAGGC CGCTGGTTAC GTAATACCAC TTACCTGGAT
CAATACATAC AATACTGGTA TCTGAAAGAT GCACAGCAGA AAGCTCCCCG TTTTCATCAG
TTCAGCAGCT GGGCCGCTGA CGCGGTATAC AACCGTTTCC TGGTAGATGG TGATAGCAGC
TTTGTAAAAG TATTACTGCC GGCTATGGAT GAAGATTATC GGCTGTGGGA GAGAGAAAAA
CGCTTACCTG ATGGACTGTT CTGGCAATTT GATGTAAAGG ATGGCATGGA AGAATCTATC
AGTGGCGCAC GGAGGGAAAA ACATACGCGT CCCACTATCA GCAGTTACAT GTATGGCAAT
GCCAATGCAC TCGCAAAGAT AGCAACGATG GCAGCTAACG ATACTTTGCG TACGCGTTAT
ACCGCTGATG CAAAAAAGAT CCGCAATCTG GTACAAACAC AGCTCTGGGA TGATACTGCT
GCTTTCTTTA AAGTAAGACA GGTCATTAAA GGCAGCGAAA CTACCCGCTT TTCCAATGCG
CGTGAACAGA TCGGTTTTAT TCCCTGGTAT TTCGACCTGC CGGCAGATAA GTCTAAGTAT
GCGGCTGCCT GGGAACAGTT GACCGATACC AGCGGGTTCG ATGCGCCCTG GGGATTAACG
ACTGCTGAAA GAAGGCATCC GCTGTTTCGC TCTCATGGTA GTGGTGGTTG TGAATGGGAT
GGCGCGATAT GGCCCTTTGC TACTACACAG ACGCTGAAAG GACTGGCTAA CTTACTGACA
CATTATAAGC ATAAAGATGG AATGACACCA GCCGTTTATT ACAATACACT ACTGGTGTAT
GCCCGTTCCC AACAGAAGAA CGGTGTACCT TATCTCGGAG AATACCAGGA TGAGCGTACT
GGTTACTGGT TAAAAGGGGA TGATCCAAGG AGTAGTTATT ATAATCATTC TGGTTTTTGT
GATCTGGTGA TTAATGATCT GATCGGGTTG AAGCCCCGGG CGGATGGGAA GCTGGAATTG
TATCCGTTGA TTCCGCAAGG AAAGTGGGAT TGGTTTTACC TGGAGGGTGT GCCGTATCAT
GGGAAGGTGG TGAGTGTGAG ATGGGATAAG ACAGGGGAGA GATATGGAAA AGGGAAGGGG
CTGAGGATTG TTGTGGATGG GAAGGAGGTG TATAGTGGGA AGGGGTTAAA CAGGGTGGTG
GTGAAGGGAT TTTAG
 
Protein sequence
MGSVKVIIAV CLFLPLRLLA QQVNVSSGKA MTLEPVLKKY VDRFNSLDSE YVKNYVSNAD 
AFDWLKANVP LLDCPDSTIE QTYYYRWWTF RKHLKETPDG FIFTEFITPV KHAGRFNALS
CAFGHHVYEG RWLRNTTYLD QYIQYWYLKD AQQKAPRFHQ FSSWAADAVY NRFLVDGDSS
FVKVLLPAMD EDYRLWEREK RLPDGLFWQF DVKDGMEESI SGARREKHTR PTISSYMYGN
ANALAKIATM AANDTLRTRY TADAKKIRNL VQTQLWDDTA AFFKVRQVIK GSETTRFSNA
REQIGFIPWY FDLPADKSKY AAAWEQLTDT SGFDAPWGLT TAERRHPLFR SHGSGGCEWD
GAIWPFATTQ TLKGLANLLT HYKHKDGMTP AVYYNTLLVY ARSQQKNGVP YLGEYQDERT
GYWLKGDDPR SSYYNHSGFC DLVINDLIGL KPRADGKLEL YPLIPQGKWD WFYLEGVPYH
GKVVSVRWDK TGERYGKGKG LRIVVDGKEV YSGKGLNRVV VKGF