| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1807 |
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| Symbol | |
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| ID | 8357958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2201221 |
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| End bp | 2204976 |
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| Gene Length | 3756 bp |
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| Protein Length | 1251 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644963995 |
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| Product | alpha-L-rhamnosidase |
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| Protein accession | YP_003121504 |
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| Protein GI | 256420851 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4692] Predicted neuraminidase (sialidase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0999515 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTTTT ATCTCTACAT ACTATTCTTT CTCGGATACA TGCAGTCATT AAGAGCTGCT
GCCCCTGTAT CGCTTGCCAA TCTCCGTTGT GAGATGTTGG TCAACCCACA GGGTATTGAT
GTCACACATC CCCGCTTTAG CTGGGAAATC AATGCCAGCG GCCGTAATGT GATGCAGGTC
GCTTATCAGA TCCAGGTGGC TGCTACACGG GAGAAGCTAT TGGCCGATGA GGCAGATCTC
TGGAACAGTG GTAAAGTAAG CGCCGGTACC AGTATTCATA TTCCTTATGA GGGAAATACA
TTAGAAAGCC GGCAGCATTG TTACTGGCGG GTGCGTGTGT GGACAAATAC CGGTGCTACT
GAGTGGAGCG AGGTGAATGA ATGGAGTATG GGTCTGTTGC AAACGACGGA TTGGAAAGCC
CGTTGGATAG GTGTGGATAA GGCGTTCCCC TGGGACAGTG CGCAATCGAA ATTCTCCCGT
TTGTCTGCCA GGTATTACCG GAAGTCCTTT CCTGTAAAAC AACCGGTAAA AAGAGCTACG
GTGTATATCG CCGGACTCGG ACTATATGAG TTATACATCA ATGGACAACG AACCGGTTCG
GCTGTATTGT CACAAGCGCC TACAGACTAC AGAAAGTCGG TAAAGTACAA TACTTATGAC
GTTACCACCG CTGTACAACA GGGAGAAAAT GTGATAGGAA CGGTATTGGG GAATGGCAGG
TATTTCATGA TGCGTCAGAA TTATAAGCCA CATAAGATCA CCACATTTGG TTATCCACGT
TTATTGCTGC AACTCGAACT TGAATATGCA GATGGTAAAA AAGAAACCAT CATCAGTGAT
GAAAAATGGA AACTGACTGC GGATGGTCCT GTGCGTACCA ACAACGAATA TGATGGGGAA
GAGTATGACG CGAATAAAGA AATGCCGGGA TGGAATAAGC AAGGGTTTAA TGACCAGCAA
TGGTTAGCTG CGGCAATTGT GCCTGCACCA GCAGGTGCGT TACAGGCACA GATGAATGAA
CCGATGCGTA TCGTAAAGAA ACTGGCTCCT GTATCTGTTA GAGAAAAATC AGCAGGTGTG
TATATCGTGG ATATGGGGCA GAATATGGTA GGGTGGTTGC ACATGAAGGT CAATGGCCGA
CAAGGGCAAC AGGTGGTACT ACGTTTTGCA GAAACCCTGA AAAATGATAC CGCATTATAT
GTGGATAACT TGCGTGATGC GAAAGTAACG GATGTCTATA CCCTGAAGGG TAAAGGAGCC
GAAACCTGGT CGCCTTCATT TGTGTATCAC GGCTTCCGCT ATGCAGAGAT CAGCGGTTAT
CCTGGTAAAC TGGACATAGC TGATCTTGAA GGACAGGTCA TCAGTGATGA TCTCAGTGCT
ACAGGCACCT TTGAAACGGC TGATCCAACG ATCAATAGTA TTTATAAAAA CGCTTACTGG
GGTATCATCG GTAACTATAA AGGGATGCCA ATAGATTGTC CGCAGAGAAA TGAACGGATG
CCCTGGCTGG GGGATCGTCC AACGGGTGCT TATGGAGAAA GTTTTCTGTT TGATAATGCA
AAGTTGTATG CTAAATGGTT AGATGACATA GAACAGTCGC AGACTGCCGC CGGAGCCATT
CCGGATGTAG CGCCGGCTTA CTGGAACTAT TATTCGGATA ATATGACCTG GCCGGGTACC
TACCTGATGA TTGCTGATAT GCTGTATCAT CAGTATGGTG ATCTGCAACC CATCAGAAAG
CACTATGCTT CCATGAAGCG CTGGCTGGAT TATATGTGTT CAAAATACCT GGTAGACGGT
ATTATGACCA AAGATAAATA CGGTGATTGG TGCGTACCGC CGGAATCTAA GCAGCTGATT
CATTCAAAGG ATTCTTCCCG TATTACGGAA GGGACATTGT TATCCACCGC TTATTACTAT
CGTTATCTGC AGATGATGAG TCGTTTTGCC AGCTTGTTGG ATCAACAGCA GGATGCAGCT
GCTTTCAAAG CCTCCGCTGA GCTTATAAAA ACAGCTTTCA ACAAGCGTTT CTTCCACAAT
AGCTATTATG GTAACAATAC CGTAACCGCC AATCTCCTGC CTTTGTCTTT TGACATGGTG
CCTGCTGCTG ATCGTAAACA GGTATTCACG CACATTGCTG ACAGTACGCT GTTGAAATAT
GGTGGGCATA TCAGCACAGG TGTGATCGGT ACGCAATGGC TCATGCGTGG CTTAACAGCT
GCTGGCCGTC CTGATCTTGC ATATCTCATT GCTGCCGACA GGGATTATCC CGGATGGGGT
TATATGGTTG CAAATGGCGC TACAACGATA TGGGAGCTCT GGAATGGCAA TACCGCCAAT
CCGGCGATGA ATTCGCATAA CCACGTCATG TTACTGGGCG ATCTGTTGAT ATGGCTGTAT
GAAGATATTG CCGGTATTAA AAGCGACGGA CCTGCATTTA GTCACCTGAT CATGCGTCCT
TCGCTGGTAC CAGGTATGGA CTATGCGAAT GCCTCTTTTC ATTCAATACA TGGCATGGTG
CGTAGCAGCT GGAGAAAAGC CGTGAATCAA TTCAGCTGGA ATATCAGTAT CCCTGCGAAT
ACGACAGCTA CCATTTATGT GCCTGCATAT GCGATCAGTG CGGTGAAAGA AAGTGGAATG
CCGGTTTCCG GGAATAAGGA TATCAGCTTC CTGCGGATGG AAGATGGTAA GGCGGTATTT
AAAATCGGTT CAGGTGATTA TACATTCAGC TCCGACCTGC AACAACCCTG GAAGAAAGGC
ATCGTAGAAG ATGAATATAT TTTTATGGAT GCGCCTTTCC CGGAAAGTCA TGCGGCTACT
ATTGCAGAGA CAAGTGACGG TCTGGTGGCT GCCTGGTTTG GAGGCACAAA AGAAAGAAAC
CCAGATGTAG GTATATGGGT CAGTCGAAAG GAAGGTAATA CATGGACTGC TCCGGTAGAA
GTAGCAAATG GTATACTGTC AGATACTTTG CGGGTAGCCT GCTGGAATCC GGTATTATAC
CAGGTGCCTG GTGGTGAATT ACACTTATAC TATAAAACAG GTACAAAGGT CGCTACCTGG
GTAGGTTGGA TGCGTACTTC CAATGATGGC GGAAGGACAT GGTCTGCCGC CAAAGCCTTA
CCGGAAGGTT TCCTTGGTCC GGTAAAGAAC AAGCCTGTGC TGCTGGACAA CGGTGAATTG
CTTTGTCCGT CCAGTACAGA AGGCAGTGGC TGGAAAGTAC ATTTTGAATG TACCCCTGAT
AATGGTAAGA CCTGGACCAT GAGAGGGCCG ATCAATGACG GTAAGACATT CAATACCATT
CAGCCAAGTA TTCTGACATA TGGTAAAGGG AAACTACAGA TACTGTGTCG TAGTAAGGAA
GGCTCCGTCG TACAGTCATG GTCAACCGAC AATGGCCGTA CCTGGTCGCC CATGTCAGCC
ACTGAATTGC CTAACAATAA CTCCGGTACT GATGCAGTGA CACTGAAAGA TGGTCGTCAG
CTGATTGTGT ATAACCATGT AAAAACACCA AAAGGAAAAT CCAAAGGTGC GCGTACACCA
TTAAATGTTG CGATCTCTGA GGATGGTATA CACTGGTCCG CGGCACTGGT ACTGGAAGAT
TCTCCGGTGA GTCAATATTC TTATCCTTCC GTGATACAGA CCGCAGACGG TTATGTACAT
ATTGTATACA CCTGGCGCAG ACAGCGTATC AAACATGTGA AGATCGATCC GCGGGCGCTG
GAACTGAAAC CTATAAAAAA CGAGCAATGG CCATGA
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| Protein sequence | MRFYLYILFF LGYMQSLRAA APVSLANLRC EMLVNPQGID VTHPRFSWEI NASGRNVMQV
AYQIQVAATR EKLLADEADL WNSGKVSAGT SIHIPYEGNT LESRQHCYWR VRVWTNTGAT
EWSEVNEWSM GLLQTTDWKA RWIGVDKAFP WDSAQSKFSR LSARYYRKSF PVKQPVKRAT
VYIAGLGLYE LYINGQRTGS AVLSQAPTDY RKSVKYNTYD VTTAVQQGEN VIGTVLGNGR
YFMMRQNYKP HKITTFGYPR LLLQLELEYA DGKKETIISD EKWKLTADGP VRTNNEYDGE
EYDANKEMPG WNKQGFNDQQ WLAAAIVPAP AGALQAQMNE PMRIVKKLAP VSVREKSAGV
YIVDMGQNMV GWLHMKVNGR QGQQVVLRFA ETLKNDTALY VDNLRDAKVT DVYTLKGKGA
ETWSPSFVYH GFRYAEISGY PGKLDIADLE GQVISDDLSA TGTFETADPT INSIYKNAYW
GIIGNYKGMP IDCPQRNERM PWLGDRPTGA YGESFLFDNA KLYAKWLDDI EQSQTAAGAI
PDVAPAYWNY YSDNMTWPGT YLMIADMLYH QYGDLQPIRK HYASMKRWLD YMCSKYLVDG
IMTKDKYGDW CVPPESKQLI HSKDSSRITE GTLLSTAYYY RYLQMMSRFA SLLDQQQDAA
AFKASAELIK TAFNKRFFHN SYYGNNTVTA NLLPLSFDMV PAADRKQVFT HIADSTLLKY
GGHISTGVIG TQWLMRGLTA AGRPDLAYLI AADRDYPGWG YMVANGATTI WELWNGNTAN
PAMNSHNHVM LLGDLLIWLY EDIAGIKSDG PAFSHLIMRP SLVPGMDYAN ASFHSIHGMV
RSSWRKAVNQ FSWNISIPAN TTATIYVPAY AISAVKESGM PVSGNKDISF LRMEDGKAVF
KIGSGDYTFS SDLQQPWKKG IVEDEYIFMD APFPESHAAT IAETSDGLVA AWFGGTKERN
PDVGIWVSRK EGNTWTAPVE VANGILSDTL RVACWNPVLY QVPGGELHLY YKTGTKVATW
VGWMRTSNDG GRTWSAAKAL PEGFLGPVKN KPVLLDNGEL LCPSSTEGSG WKVHFECTPD
NGKTWTMRGP INDGKTFNTI QPSILTYGKG KLQILCRSKE GSVVQSWSTD NGRTWSPMSA
TELPNNNSGT DAVTLKDGRQ LIVYNHVKTP KGKSKGARTP LNVAISEDGI HWSAALVLED
SPVSQYSYPS VIQTADGYVH IVYTWRRQRI KHVKIDPRAL ELKPIKNEQW P
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