| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1778 |
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| Symbol | |
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| ID | 8357929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2155170 |
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| End bp | 2156684 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644963966 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003121475 |
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| Protein GI | 256420822 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0496673 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTT TACTGCTTAT AACAATATGT TGTTGCACGA CTGTGCTGAC AGGATGTAAC
AAGTTGCTCG ATATTAACTC TTCTCATGCA GTATCAGAGG AAAACTTCTG GAACTCGCAT
GAGGATACCC GTACGGCGCT TATCGGCGTA TACGGACTCT TACGTGCCGC TATGGCGGAC
AATAACGCCT GGTGGATGTA TGGGGAATTC CGTAAAGGAG ACTTCTTCGC CATCCAAAGA
CAGGATATGA AGGCACTTAT CCGTAATGAC CTGCGGGCAG CTTATCCTTT GCTGGAACAA
CTCTCTAACT GGCGTCGCTT CTATGCAGTG ATCAATGCGG CGAATATGTT CCTTGAACAC
GTTGGTGAGG TAAAAGCACG CGATCCTAAA TATTCAGACG AGAATATGCG GGTAGACATC
GCACAGATGC GTTGTATACG TGCCTATGTT TATTTCTTCC TTGTATCCGT ATGGGGGGAT
GTACCCCTGA TCACCGCTTC TCATGACGGT GAGTTTGCCA ACAAGGCAAG AGAAAGCAAA
GAAAATGTAC TGGCATTTGT AGAAAAGGAA CTGGTACAGT CAGCGGCTGA TCTGCCTTAT
AAATATAGCG CCAACGATCC ACAGCAATCC GGTAGTTACT ATAACGAAAC CGATACCCGC
TGGTCAGGTG TACTGGCGCG TAAACACACT GCCTACGCTA TTCTGGCCCA TGTGGCAGCC
TGGCAGGGTA AGTATGTGGA TGCATCCGTA TACGCACAGT TTGTACTGGA TAATTACTCA
AAAGGCGGCA GCTATTACAT CAACACAGAC GAACTGGTTA ACAGCAACGG TTTTTTCAAA
TGGAAAAAGG ACAATCACAT CCTGGCATTC AACTTCGACT GGGGCCATGT GGATGCTACT
TTCTCCGGTC ACCTGGAAGA ACTGACCCTG GCAGCACCGG TTGTGAATAA AGCCCTGCCG
GATATCTATG TTCCAAAAGA TACGATTCTG TCCGTCTTTG ACCGGCCATC TGACGAGCGG
TTTAGTCTGG ATACGCTCAC TGGCGTACCT ACATCCCAAC GCTACTTTGC CAATTTCAAC
AGCCAGATTC CCATTTTCAA TAAAATAAAA GTGATCCAGG ATGGTAATAC GTCAGATCCT
TCCTTCAGGA TCTATTCCAG CACCATCATC ATTACCCGCC TGGAAAACAT TGCCCTGTTA
CAGGCAGAAT CACTGGCCGT AATCGGCGAA CAGCAAAGGG CCATTGACCT GCTGAATACG
ATCAGAGATC TGCGTAAGAT CAAAAGATAT GATGCCGCCA CAGAAGGTGA TCTGATTGAC
GCCATTTTCA GGGAACGTCG TAAAGAACTG ATGGGAGAGG GCTGGCGCTG GTTTGACCTG
ATCCGCTATA ACAAGATCAA ACAGAATGAT CCTGCCTTTA TGGAACTGAT TGCCAAAGGT
GGTATCTATT GGCCCGTGGC AGAAGATGTT ATAAAACAGA ACCCATTGAT CACCCAGAAT
CCTTATTGGC AATGA
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| Protein sequence | MKRLLLITIC CCTTVLTGCN KLLDINSSHA VSEENFWNSH EDTRTALIGV YGLLRAAMAD
NNAWWMYGEF RKGDFFAIQR QDMKALIRND LRAAYPLLEQ LSNWRRFYAV INAANMFLEH
VGEVKARDPK YSDENMRVDI AQMRCIRAYV YFFLVSVWGD VPLITASHDG EFANKARESK
ENVLAFVEKE LVQSAADLPY KYSANDPQQS GSYYNETDTR WSGVLARKHT AYAILAHVAA
WQGKYVDASV YAQFVLDNYS KGGSYYINTD ELVNSNGFFK WKKDNHILAF NFDWGHVDAT
FSGHLEELTL AAPVVNKALP DIYVPKDTIL SVFDRPSDER FSLDTLTGVP TSQRYFANFN
SQIPIFNKIK VIQDGNTSDP SFRIYSSTII ITRLENIALL QAESLAVIGE QQRAIDLLNT
IRDLRKIKRY DAATEGDLID AIFRERRKEL MGEGWRWFDL IRYNKIKQND PAFMELIAKG
GIYWPVAEDV IKQNPLITQN PYWQ
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