Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1735 |
Symbol | |
ID | 8357885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 2091344 |
End bp | 2092792 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644963922 |
Product | hypothetical protein |
Protein accession | YP_003121432 |
Protein GI | 256420779 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00608249 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAGAA AAGCGCTATA TATACTCCTG GCTATTCTCC CGTCCGTAAC CGGATGTAAA AAATATCTCG ATCAGCAACC GGATAGTACC TGGACACAAC TGGATACTCC TGAAAAGGTG AGTCAGTTGC TGGGTACTGC TTATCCGCAG GCTAACTATA TGACTTTCTG TGAAGCCATG TCAGATAACG TAGCCGATAA AGGTACTGGT GTCGACGTAC GTACCAATAG AGACCCTTTC TATTTTGATG ATGTGCAGAA CATCAACCAG GATTCTCCTG AATATTACTG GGCGGCTGCC TATACCGCTA TCGCTGCAGC TAACAATGCC CTGATCGCCT GTGAAAATGC AAAGGATACA GCTGCTTATA GTCGTCAGAA AGGGGAGGCA CTCGTAGCAC GCGCATATGC ACATTTTATG CTGGTGAATA TCTTCTCCAG AAGTTATGAT GCAACAACCG CTAATGCAGA TATGGGCATC CCATATGTTA CCGAGCCGGA AGAAGTAGTA TTCAAACAGT ACGACAGGAA AACGGTCGCT TATGTATACG ATCAGATTGA GAAAGACCTG CTGGCAGGTT TACCATTGAT CCGCGATGAT AAGTACAAGG TGCCTAAGTA CCATTTCAAC CAGAAAGCAG CGTATGCTTT TGCGGCAAGA TTTTACCTCT ACAAACGCGA CTATCAGAAA GTGATTACCT ATGCGGATAT GGCTTTCACA ACAGGCCAGG CAGTGAGCTA TCTGCGTCCA TGGAATACTT CCTACGTATT CCTTTCTCCA CTGGAATTGT TCAACATCTA TTCTAACTCC AGCGAGAACG CCAACTTCCT GCTGGTAGAA ACCAATTCCA GCTACGGCCG TAACCTGGCG CAATACCGCT TTGGTATGAA CTTTCCGATG TACAGAGCAA TCATGGGGAG CAACGTAACC GGTGGAGACT GGTGCTTTCC GGCATATACC TATGGTACTG CCGATTACTT CATCCCTAAG CTGAGTGAAT ATTTTGTAAA GGAATCTGTG AATGCGACCA TTGGTTACAT ATACACCATG GTGCCTTTGT TCACTGCAGA AGAAGTACTG TTTAACAGGG CAGAAGCAAA TGCACAACTG GGGAATACCA CCGCTGTTCT TGCTGATCTG AATACCTACG CCGGTACCCG TATCACCAAT TACGATGCAA GTGCTGATGT TGTGACACTG GCGAAGTGCA AAAGTTACTA TGGTCTTTCA GATAGTAAAG GCGCACTGTT AAATGCCGTA CTGGATTTCA AAAGAGCGGA ATTCGTACAG GAAGGTACGC GCTGGTTTGA CCTGATGCGT TACAAAGTAC CCGTTACACA TGTAACCAGT CAGGGACAGA CGATGATACT CGGAGCAGAC GATCCGCGCA GGGTCTTCCA GATACCGGTA TCTGCAAAAA CATCCGGACT TCCATTAAAT CCCCGCTAA
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Protein sequence | MQRKALYILL AILPSVTGCK KYLDQQPDST WTQLDTPEKV SQLLGTAYPQ ANYMTFCEAM SDNVADKGTG VDVRTNRDPF YFDDVQNINQ DSPEYYWAAA YTAIAAANNA LIACENAKDT AAYSRQKGEA LVARAYAHFM LVNIFSRSYD ATTANADMGI PYVTEPEEVV FKQYDRKTVA YVYDQIEKDL LAGLPLIRDD KYKVPKYHFN QKAAYAFAAR FYLYKRDYQK VITYADMAFT TGQAVSYLRP WNTSYVFLSP LELFNIYSNS SENANFLLVE TNSSYGRNLA QYRFGMNFPM YRAIMGSNVT GGDWCFPAYT YGTADYFIPK LSEYFVKESV NATIGYIYTM VPLFTAEEVL FNRAEANAQL GNTTAVLADL NTYAGTRITN YDASADVVTL AKCKSYYGLS DSKGALLNAV LDFKRAEFVQ EGTRWFDLMR YKVPVTHVTS QGQTMILGAD DPRRVFQIPV SAKTSGLPLN PR
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