Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1731 |
Symbol | |
ID | 8357881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 2083842 |
End bp | 2084777 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644963918 |
Product | hypothetical protein |
Protein accession | YP_003121428 |
Protein GI | 256420775 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.448661 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTAAAC GGACCATCTT TAACAGTCTG CTGTTATTAT TGCTATCCAT AGCCATATCA GCACCTGCAC AGAAAAAGAA AAAGGAACAT AAGAAGAAAG ATAAACAGGA ACAATCATCC TCCGGAAAAA AGAAAGTACA GCCAAACGCA TCTGTCCAGC CGCAGGTACT GGGGATCGTA CAAAGTTCGG CCATTCAGGA AGCTTCCGGT CTTGCTGCCA GCAGGGCGCT GCCGGGTTAC TTCTGGACAC ACAACGATAG TGGTAATAAA CCCGAGGTCT ATCTCCTTGA TAATAAAGGG CAACTGATCA GCACTATTCA GCTTGAAGGC ATCAAAAACC GTGATTGGGA AGACATAGCG GAAGGCGCCG GCCCGATTCC ACATAAGCAA TATGTATATG TCGGCGATAT TGGTAACAAT ATCCGTCTGG ACCTGCATAC CCGTATTTAT CGTTTTCAGG CCCCTTCCCA GGCACCAGCG AGCAAAACAA CAGTCAAGCC GGAGACACTG CAGATCAGCT ATCCTGATGG CCCCAGAGAC GCAGAAACGG TCATGGTAGA CCCGATAAAC AAGTTCCTGT ATGTGGTAAG CAAAAGAGAG AAAGCGGTAG GCATTTATAA AACGCCGCTG CACTTCAGGG ATGGTGAAAA GGTGGTTATG CAGAAAGTAG GTACTGTACC TTATACCTGG ATCACTGCGG GTGATATTTC ACAGGATGGT AGGCATATTG TGATCAAGGA TAAAAGCCTG GTGTATTACT GGAGCCGGCA GGCAGGGGAA ACGGTGGAAG CGGCAATGGC CAGACCGGCA GTTAGCTTGC CATATGTACC CGAGCAGCAG GGAGAAGGTA TTGCCTTAAT GCCGGATAAT TCGGGCTATG TGACGATCAG TGAAGGAAAG AACCCGGCGC TGAATTTTTA CCCCCATCGG TTCTAA
|
Protein sequence | MSKRTIFNSL LLLLLSIAIS APAQKKKKEH KKKDKQEQSS SGKKKVQPNA SVQPQVLGIV QSSAIQEASG LAASRALPGY FWTHNDSGNK PEVYLLDNKG QLISTIQLEG IKNRDWEDIA EGAGPIPHKQ YVYVGDIGNN IRLDLHTRIY RFQAPSQAPA SKTTVKPETL QISYPDGPRD AETVMVDPIN KFLYVVSKRE KAVGIYKTPL HFRDGEKVVM QKVGTVPYTW ITAGDISQDG RHIVIKDKSL VYYWSRQAGE TVEAAMARPA VSLPYVPEQQ GEGIALMPDN SGYVTISEGK NPALNFYPHR F
|
| |