| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1729 |
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| Symbol | |
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| ID | 8357879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2080497 |
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| End bp | 2082821 |
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| Gene Length | 2325 bp |
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| Protein Length | 774 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644963916 |
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| Product | alpha-L-rhamnosidase |
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| Protein accession | YP_003121426 |
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| Protein GI | 256420773 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGAATTA TTCTGACCGC AGCGTTCTTG CTGATTACCA GTATTGTAAG CGCACAGTAT
AACGCCTGGA AAGGCAGCTG GATCACCAAT ACGGAAGATA CCACCGCTAC AAAGGCGCCT
TATTTAAGAA AGACATTTAC ACTGGATAAG AAGGTAGTCA GCGCGACTGC CTACGTAGCC
GGCGTGGGGT ATCATATTGT ATTTGTAAAT GGTAAGCCTG TTACAGATGC TGTATTGGAA
CAGGCATATA CCCGCTATGA TAAACGCCTG TTATACAAGG TGTATGATGT AACAGCCTTA
TTATCCCGCA AAGGTACACA GAGCATCGCG GCCGAATTAG GTAATGGATG GTATAATATC
CAGTCGCACG CCGTATGGGG ATTCCAGAAT GCACCATGGA GGAAAACGCC ACGCCTCTTA
CTGGATCTCG TGATCCGGTA TGATGATGGA ACGACGGAAA CAATCGCTAC GGATAATAGC
TGGAAATGTG CAACCGGTCC CAGCCAGTTT AACTGTTTAT ATTCCGGTGA GATCTATGAT
GCCCGTCAGG AAGTAGCCGG CTGGAATCAG ACAGCCTTTA ATGATGCCGG CTGGAAACAG
GTATTGCTGA CATCTTCTCC CGGTGGTGCG TTACATGAGC AGATCATGCC TTCTATTAAA
GTGATACGCC GTATCAAGCC TGTATCCATG AAGAACCTGG GTAATGGAAA ATACCTGTTT
GACATGGGAC AGAACTTCGC CGGTGTGGCT ACCTTGAACG TAAAAGGACA GGCCGGTACG
AAGGTAACAA TGTACTATGG AGAGGTGTTG AAAAACGGTG AACTGGATAT GGTGCATAAC
ACAGAGCATA TGCGTAGTAT GCCCGGTGAA CTGCGTTTTC AGACCGATGT GTATTTCCTG
AAAGGCGGTG CCCGTGAAGT GTTTACCCCA CGTTTTGTAT ACCACGGATT TCAGTATGTG
CAGATAGAAA CAGACCAGCC GCTTGAGCTG AATGTACATT CACTGGAAGG ACTTTTCTAC
AGTACTGCGT TTGAAGAAGC AGGGCATTTT ACAAGCTCTG ATCCCATGAT CAATAAACTG
TACGAAGCAG CCCGTCAGTC TTATCGCAGT AACTTCCTCA GTATCCCTAC GGATTGTCCG
CAGCGTGAAA AGAATGGCTG GACGGCCGAT GCACATATTT CTACAGAGAT CGGTCTCTGG
AATTATCAGA CGACAGAAGG CTATCGCAAA TGGTTGCATG ATGTACGCGA CGCCCAGTTG
CCAAGCGGCG CTATGCCCGG TATTGCTCCT TCTAACGGAT GGGGATATGA CCGCCCCGGT
AATGAAGAGT TTACATTCGG TCCTGCCTGG GGCAGTGCCT TAGGTTTTGT TACCTGGTAT
ATGTATCTCT ATCATAATGA CACTGCACTG GTAAGAGAGC ATTACGATGC CTTTAAAAAG
TATACGGATG CTGTAGCAAA AGGAGCGGAA GGTTACCTGT TCAAACATGG ACTGGATGAC
TGGATGTCTT TAGTGAAAAC ACCCATGCCG CTGACTTCTA CTGCTTATTT TTATACTGAT
GCAGAACTTG TCGCAAAGAT GGCGCGTGTC TTAGGTAATA AGGCTGACGA ACAAACGTAC
AGCAGATTAG CCGACAGCAT CCGTGCTGCC TTTAACCGCA CCTATTTTGA TGCAAATACC
GGTGTGTACA AAGACAGTAC TATGACCGCA TTAAGTGCTG CTGTATTCCA CGGACTGGCT
TCTCCGGAAG CAGCAGCAAA GACAGCTGCA CAGTTATCTT CAAAAGTACA GCGTAGTAAC
TACCATGCGG ATTTTGGAGT GATGGGTACC AAATATGTTT TACCTACCCT GAGTGATTAC
GGTTATGCAG ATGTGGCATT CAGAATGCTG ACTGATACCG GTTACGCCGG TTGGGCACAT
TGGATTGCCA ACGGTGCAAC TACTTTGTTT GAAGACTGGC CGGGAGAATT ATCCCATAAC
CACATCTTCT TCGGCGATTA CTGTGCATGG TATTATAAAA CACTTGCAGG TATCCGTCCA
GATGAAGCAG CGCCTGGTTT CCAGCATTTT TACATACAAC CCGCGTTTGT AAAAGCACTG
AATTTTGTAA AGGCGGATTA TGCCAGCAGT GCAGGTATGA TTAAAGTAGA ATGGAAGCGT
AAAGGAAACA GTATAAAACT ATCTGTTGAA ATACCTTCAC GTGCAACGGT AAGATTACCA
GCCGGTATGA CAGATGATAA AAACGCAACA CGTATTACCT TGAATGGTCA GCAGTTTGAT
CAGGTTGTAC TGACACCCGG TAAGTACACA TTTAACCTGA AATGA
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| Protein sequence | MRIILTAAFL LITSIVSAQY NAWKGSWITN TEDTTATKAP YLRKTFTLDK KVVSATAYVA
GVGYHIVFVN GKPVTDAVLE QAYTRYDKRL LYKVYDVTAL LSRKGTQSIA AELGNGWYNI
QSHAVWGFQN APWRKTPRLL LDLVIRYDDG TTETIATDNS WKCATGPSQF NCLYSGEIYD
ARQEVAGWNQ TAFNDAGWKQ VLLTSSPGGA LHEQIMPSIK VIRRIKPVSM KNLGNGKYLF
DMGQNFAGVA TLNVKGQAGT KVTMYYGEVL KNGELDMVHN TEHMRSMPGE LRFQTDVYFL
KGGAREVFTP RFVYHGFQYV QIETDQPLEL NVHSLEGLFY STAFEEAGHF TSSDPMINKL
YEAARQSYRS NFLSIPTDCP QREKNGWTAD AHISTEIGLW NYQTTEGYRK WLHDVRDAQL
PSGAMPGIAP SNGWGYDRPG NEEFTFGPAW GSALGFVTWY MYLYHNDTAL VREHYDAFKK
YTDAVAKGAE GYLFKHGLDD WMSLVKTPMP LTSTAYFYTD AELVAKMARV LGNKADEQTY
SRLADSIRAA FNRTYFDANT GVYKDSTMTA LSAAVFHGLA SPEAAAKTAA QLSSKVQRSN
YHADFGVMGT KYVLPTLSDY GYADVAFRML TDTGYAGWAH WIANGATTLF EDWPGELSHN
HIFFGDYCAW YYKTLAGIRP DEAAPGFQHF YIQPAFVKAL NFVKADYASS AGMIKVEWKR
KGNSIKLSVE IPSRATVRLP AGMTDDKNAT RITLNGQQFD QVVLTPGKYT FNLK
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