| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1722 |
|---|
| Symbol | |
|---|
| ID | 8357871 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 2072551 |
|---|
| End bp | 2073603 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 644963908 |
|---|
| Product | glycosyl transferase family 9 |
|---|
| Protein accession | YP_003121419 |
|---|
| Protein GI | 256420766 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGAAA AACTGAGAAC AATACTGGCG ATCCGGTTTT CTGCCATGGG AGACGTAGCA
ATGACAATTC CCGTGATGCA GCAGGTATTG GAACAAAACC CTGGTACACA GATCATTTTC
GTATCAAACA GGAACTGGGG TGCACTTTGT GCCGGTATTC CCCGGCTGAC TTTTTTTCCG
GCCGATCTGA AAGGCACACA CAAGGGATTT AAAGGTCTGT ACCGGCTTTT CCGGGAAATC
AGCAAGGCGC ATAAAATTGA CGCCGTTGCT GACCTTCACC ATGTATTGCG CTCACAGATC
GTACGTTCCT TTTTCCGGCT GAGTGGCCGT AAAGTAGCTG CGATCGATAA AGGCAGGGCC
GAAAAGAAAG CACTTGCCCG TCCGGAAGAA AAAGTACTGA TACCTTTAAC CAGCACTATA
GAGCGATATG CGACCGTTTT CAGGCAATTG GGGCTCCCGG TTACTATTTA TCCAAAACAG
CCTGTATTTG GCCGTCAGGA GTTAACAGCG GCCATACAGG AAGTCACCGG ACCCAAAAAC
GGAGATAAGT GGATCGGATT GGCGCCATTT GCCACCTATA AGGAGAAAAC ATATCCCCTG
GCTAAAATGG AGGAAGTGCT GGCGGCACTC GTGAAAAAGA AGCAGACAAA AGTACTGCTG
ATGGGAGGGG GCGCCGCAGA AGTCACACAA CTGACCACAT TGGCTGTAAA GTATCCGGAA
GCAATCATCG TAGCAGGCAG GTTCCGTCTG CCGGAAGAAA TGGCTACCAT CAGCAATATG
GATACCATGA TCAGCATGGA CTCCGCCAAT ATGCACCTGG CTTCTCTTTT TGGCGTACCG
GTCGTTTCCG TCTGGGGTGC TACGCATCCT TTTGCCGGCT TTATGGGTTT CGGACAAACA
GAGGACAATG CCGTACAACT GGAAAGCCTT TCCTGTCGTC CTTGTTCCAT ATTTGGTAAT
AAGCCCTGTT TTCGCGGTGA TCATGCCTGT ATGGAGTGGA TTCCACCTGC TGCAATCACT
GAGAAAGTGA CAAAAGTGGT CGGCGAATCC TAA
|
|---|
| Protein sequence | MPEKLRTILA IRFSAMGDVA MTIPVMQQVL EQNPGTQIIF VSNRNWGALC AGIPRLTFFP
ADLKGTHKGF KGLYRLFREI SKAHKIDAVA DLHHVLRSQI VRSFFRLSGR KVAAIDKGRA
EKKALARPEE KVLIPLTSTI ERYATVFRQL GLPVTIYPKQ PVFGRQELTA AIQEVTGPKN
GDKWIGLAPF ATYKEKTYPL AKMEEVLAAL VKKKQTKVLL MGGGAAEVTQ LTTLAVKYPE
AIIVAGRFRL PEEMATISNM DTMISMDSAN MHLASLFGVP VVSVWGATHP FAGFMGFGQT
EDNAVQLESL SCRPCSIFGN KPCFRGDHAC MEWIPPAAIT EKVTKVVGES
|
|---|
| |