Gene Cpin_1713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1713 
Symbol 
ID8357862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand+ 
Start bp2060311 
End bp2060934 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content42% 
IMG OID644963899 
Productouter membrane chaperone Skp (OmpH) 
Protein accessionYP_003121410 
Protein GI256420757 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2825] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACTA CTAAACAATT TGTGAAAAGC GGATTATTAG CGGTATTAAC AGCCGGAACA 
TTTATTGCTT GTCAGCAGAC TAAAAAAGAG GGTAACAGTA GCCCGGCGGC TGCTGCAAAA 
GATGGCGGTG CTGCTTCTAA TAGCGCCTTT ATCATTGCTT ATGTGGATAT CGATACCGTT 
GAAGCTCACT ACGACTATTT TAAAGTAAAG AAAGCAGAAC TTGAGAAGAA GCAACAGGCG 
ATCGACAATG AATTAAATGC TAACGTACGC GCATTACAGA ACGAGGCGGC TGATTTCCAA 
CGTCGTGTAA ATGCTAACTC CGTAACACAG GCGGAAGGCG AATCAACACA GCGTGCTTTG 
TACAACAAAC AGCAGCAACT GGAAAGTAAA GCACAGAACA TGCGTTCTGA GTATGCTGAA 
CAGGAGAATA AGTTCAATGA AGAGCTGCAG AAGAGACTGA ATGACTTCCT AGCTAAATAT 
AACGCTGATA AACGTTATGC CTATATCCTG TCATACCGTA CAGGCGCCAG CAACGTTTTA 
TACAAGGATG ATAAGTATGA CATTACTACT GAAGTAATTA AGGGCTTAAA TGACGCCAAC 
AAAGAAGCAA CTGAGAAAAA ATAA
 
Protein sequence
MRTTKQFVKS GLLAVLTAGT FIACQQTKKE GNSSPAAAAK DGGAASNSAF IIAYVDIDTV 
EAHYDYFKVK KAELEKKQQA IDNELNANVR ALQNEAADFQ RRVNANSVTQ AEGESTQRAL 
YNKQQQLESK AQNMRSEYAE QENKFNEELQ KRLNDFLAKY NADKRYAYIL SYRTGASNVL 
YKDDKYDITT EVIKGLNDAN KEATEKK